Gene Information

Name : hlyB (pO157p19)
Accession : NP_052625.1
Strain :
Genome accession: NC_002128
Putative virulence/resistance : Virulence
Product : hemolysin B
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 19658 - 21778 bp
Length : 2121 bp
Strand : +
Note : -

DNA sequence :
ATGATGAGTAAATGTAGTTCTCATAATAGTCTGTATGCACTGATATTGCTTGCACAATATCATAATATAACTGTCAATGC
TGAAACTATAAGGCATCAGTATAATACCCACACACAAGATTTTGGGGTGACTGAATGGTTACTGGCAGCGAAATCTATTG
GCTTAAAAGCAAAATATGTAGAAAAACATTTTTCCAGATTGTCAATAATTTCTTTACCTGCGTTGATATGGCGGGATGAC
GGTAAGCATTATATATTGTCTCGTATTACTAAAGATTCATCACGCTATCTTGTTTATGATCCAGAACAACATCAGTCACT
AACTTTTAGTCGGGATGAGTTTGAAAAACTGTATCAGGGAAAAGTCATTCTGGTTACGTCAAGAGCAACAGTAGTCGGAG
AGTTAGCTAAATTTGATTTTTCTTGGTTTATCCCCTCTGTTGTGAAATACAGGAGGATTTTACTTGAGGTGTTAACTGTT
TCTGCTTTTATTCAGTTTCTTGCGTTAATAACACCTCTTTTTTTTCAGGTTGTAATGGATAAGGTTTTAGTTCACCGGGG
GTTTTCAACGTTAAATATTATCACAATAGCATTTATTATAGTGATACTTTTTGAAGTGATATTAACCGGAGCCAGAACTT
ATATTTTCTCTCATACTACAAGTCGTATTGACGTCGAACTGGGTGCTAAGTTATTCAGACATTTGCTTGCATTGCCTGTT
TCATATTTTGAAAATCGCAGGGTCGGAGAGACCGTTGCCAGAGTAAGGGAACTGGAGCAAATTCGTAATTTTTTAACCGG
ACAAGCGTTGACATCAGTTCTTGATCTATTTTTTTCTGTAATATTTTTTTGTGTCATGTGGTATTACAGCCCTCAATTAA
CACTGGTTATATTATTGTCACTACCTTGTTATGTTATATGGTCATTGTTTATATCACCCTTATTACGTCGACGTCTTGAT
GATAAGTTTCTCAGGAATGCAGAAAATCAAGCTTTTCTTGTCGAAACGGTAACAGCAATAAATACAATCAAATCCATGGC
AGTATCACCACAGATGATTGCTACATGGGATAAACAACTGGCCGGGTATGTTGCTTCCAGTTTCAGGGTAAATCTGGTTG
CAATGACAGGGCAGCAGGGGATACAGCTGATACAGAAAAGTGTAATGGTAATTAGTCTATGGATGGGAGCACATCTTGTC
ATATCGGGAGAGATAAGCATCGGGCAGTTAATCGCGTTTAATATGCTTGCAGGTCAGGTCATTGCTCCTGTTATCAGACT
GGCTCATCTTTGGCAGGATTTTCAGCAGGTTGGTATTTCTGTTGAGCGCCTTGGTGATGTATTAAATACACCGGTAGAGA
AAAAGTCAGGCAGAAATATACTGCCGGAAATTCAGGGGGATATCGAATTTAAAAATGTCAGATTTCGGTATTCTTCTGAC
GGTAATGTTATTTTGAATAATATTAATTTATACATATCAAAGGGGGATGTTATCGGTATAGTTGGCCGTTCTGGTTCAGG
AAAAAGTACATTAACAAAACTGCTTCAGCGCTTTTATATACCAGAGACCGGACAGATTTTAATTGATGGGCATGATTTAT
CACTTGCAGATCCAGAATGGTTACGACGCCAGATTGGTGTTGTATTGCAGGAAAATATACTATTAAATCGTAGTATTATC
GATAATATTACATTAGCTTCTCCGGCTGTATCTATGGAACAGGCTATTGAGGCAGCCAGACTTGCAGGTGCCCATGATTT
TATTAGAGAACTAAAAGAAGGGTACAATACTATTGTTGGAGAACAGGGCGTTGGTCTTTCAGGAGGGCAGCGCCAACGGA
TCGCAATAGCCCGGGCTCTTGTTACAAATCCTCGAATTCTTATTTTTGATGAAGCAACCAGTGCTCTTGATTATGAGTCG
GAAAATATAATAATGAAAAATATGTCAAGAATATGTAAGAACAGAACCGTAATTATTATTGCACACAGGTTGTCAACTGT
AAAAAATGCAAACAGAATAATTGTTATGGATAATGGCTTTATTTCTGAAGATGGCACACATAAAGAGCTTATCTCCAAAA
AAGACAGTTTATATGCATATTTATATCAGTTGCAGGCATAA

Protein sequence :
MMSKCSSHNSLYALILLAQYHNITVNAETIRHQYNTHTQDFGVTEWLLAAKSIGLKAKYVEKHFSRLSIISLPALIWRDD
GKHYILSRITKDSSRYLVYDPEQHQSLTFSRDEFEKLYQGKVILVTSRATVVGELAKFDFSWFIPSVVKYRRILLEVLTV
SAFIQFLALITPLFFQVVMDKVLVHRGFSTLNIITIAFIIVILFEVILTGARTYIFSHTTSRIDVELGAKLFRHLLALPV
SYFENRRVGETVARVRELEQIRNFLTGQALTSVLDLFFSVIFFCVMWYYSPQLTLVILLSLPCYVIWSLFISPLLRRRLD
DKFLRNAENQAFLVETVTAINTIKSMAVSPQMIATWDKQLAGYVASSFRVNLVAMTGQQGIQLIQKSVMVISLWMGAHLV
ISGEISIGQLIAFNMLAGQVIAPVIRLAHLWQDFQQVGISVERLGDVLNTPVEKKSGRNILPEIQGDIEFKNVRFRYSSD
GNVILNNINLYISKGDVIGIVGRSGSGKSTLTKLLQRFYIPETGQILIDGHDLSLADPEWLRRQIGVVLQENILLNRSII
DNITLASPAVSMEQAIEAARLAGAHDFIRELKEGYNTIVGEQGVGLSGGQRQRIAIARALVTNPRILIFDEATSALDYES
ENIIMKNMSRICKNRTVIIIAHRLSTVKNANRIIVMDNGFISEDGTHKELISKKDSLYAYLYQLQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 73
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 73
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyB NP_052625.1 hemolysin B VFG0841 Protein 0.0 100
hlyB NP_052625.1 hemolysin B VFG1501 Protein 0.0 73
hlyB NP_052625.1 hemolysin B VFG0907 Protein 0.0 73
hlyB NP_052625.1 hemolysin B VFG1557 Protein 0.0 73
hlyB NP_052625.1 hemolysin B VFG1269 Protein 0.0 53