|
Name : CP0629 (CP0629) Accession : NP_445171.1 Strain : Chlamydophila pneumoniae AR39 Genome accession: NC_002179 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 660638 - 663256 bp Length : 2619 bp Strand : - Note : similar to GB:M29364 SP:P03815 GB:V00350 GB:X57620 PID:1236633; identified by sequence similarity DNA sequence : GTGCTTGGGGTGAATTTTATGGAGAAATTTTCCGATGCTGTCTCTGAAGCTTTAGAGAAGGCTTTCGAACTTGCTAAATC TTCGAAACATACCTATGTCACAGAAAATCACCTATTACTGGCTTTATTAGAAAATACAGAGTCTCTCTTTTATTTGGTAA TTAAGGACATTCATGGGAACCCTGGTTTGCTCAATACGGCAGTTAAAGATGCGCTCTCACGAGAGCCGACTGTAGTTGAA GGAGAGGTGGATCCTAAACCTTCTCCGGGTTTACAAACCCTTCTTAGGGATGCCAAACAAGAGGCAAAGACATTAGGAGA TGAATACATTTCTGGAGATCATCTGCTGCTTGCTTTTTGGAGTTCAAACAAAGAGCCTTTTAATTCTTGGAAGCAAACAA CAAAAGTTAGTTTTAAAGATCTTAAGAATCTGATTACTAAAATACGACGAGGAAATCGTATGGATTCGCCAAGCGCTGAA AGTAATTTTCAGGGTTTAGAAAAGTATTGTAAAAATTTAACAGCATTAGCTCGTGAAGGTAAACTGGATCCTGTGATCGG TAGAGATGAAGAAATTCGTAGAACCATCCAAGTGCTTTCCCGTAGAACTAAAAATAACCCTATGCTTATTGGTGAGCCGG GTGTAGGGAAAACTGCTATAGCAGAAGGATTAGCTCTTAGGCTTATCCAGGGTGATGTTCCTGAATCTCTCAAAGGTAAA CAGCTTTATGTCTTAGATATGGGAGCTTTGATTGCAGGAGCTAAGTATCGAGGTGAGTTTGAAGAAAGACTAAAGAGTGT TTTAAAAGATGTAGAATCTGGAGATGGCGAGCACATTATCTTTATTGATGAGGTGCATACTCTTGTTGGAGCAGGAGCTA CTGATGGAGCTATGGATGCTGCGAATCTTTTAAAGCCTGCATTAGCAAGAGGGACGCTACACTGTATTGGCGCGACGACT TTGAATGAGTATCAGAAGTATATTGAAAAAGATGCTGCTTTGGAACGTCGATTTCAGCCTATTTTTGTGACAGAGCCTTC TTTGGAGGATGCTGTCTTTATTCTTCGTGGACTAAGAGAAAAATATGAAATTTTCCATGGAGTCAGGATTACAGAGGGGG CTTTGAATGCCGCAGTCCTACTTTCCTATCGTTATATCCCAGATCGCTTTCTTCCAGATAAGGCTATCGATTTGATAGAT GAAGCGGCAAGTTTAATTCGCATGCAAATTGGTAGTCTTCCTCTTCCTATTGATGAAAAGGAGAGAGAGCTTGCTGCTTT GATCGTTAAGCAAGAGGCTATAAAACGCGAGCAATCTCCTTCCTATCAAGAAGAGGCGGATGCTATGCAGAAGTCTATAG ATGCTTTGAGAGAGGAATTAGCATCTCTACGTTTGGGTTGGGATGAAGAGAAGAAGTTGATTTCGGGGCTCAAGGAAAAA AAGAATTCCTTGGAAAGTATGAAATTTTCTGAAGAGGAGGCGGAGCGTGTTGCAGACTATAATCGTGTAGCTGAGCTTCG GTATAGTTTAATTCCCCAACTTGAAGAAGAAATCAAACAGGATGAAGCCTCTTTAAATCAAAGAGATAACCGTCTCCTTC AAGAAGAAGTTGACGAGCGATTGATTGCGCAAGTGGTAGCTAATTGGACAGGGATTCCTGTGCAAAAAATGCTAGAAGGG GAAGCTGAGAAACTGTTAATTCTTGAAGAATCCTTAGAAGAACGTGTGGTAGGACAGCCTTTTGCAGTCTCTGCGGTTAG TGATTCTATTCGTGCTGCACGTGTAGGTTTAAATGATCCTCAACGTCCCTTAGGAGTCTTTTTATTTTTAGGGCCAACAG GGGTAGGAAAAACCGAGCTTGCAAAAGCTCTTGCAGATCTTCTTTTCAATAAAGAGGAAGCTATGGTCCGCTTCGATATG TCAGAGTATATGGAAAAGCATTCCATTTCCAAGCTTATAGGATCTTCTCCAGGGTATGTGGGTTATGAGGAAGGTGGGAG TCTTTCTGAGGCTCTTCGACGACGTCCCTATTCAGTAGTTCTCTTTGATGAGATAGAGAAAGCAGATAAGGAAGTTCTAA ATATCCTTTTACAGGTTTTTGATGATGGGATTCTTACGGATGGGAAAAAACGCAAAGTAAATTGTAAAAATGCCTTGTTT ATCATGACATCAAATATAGGTTCTCCAGAACTTGCAGATTATTGTTCAAAAAAAGGAAGTGAGCTTACGAAAGAAGCGAT TCTTTCTGTAGTCTCTCCAGTATTGAAAAGATACTTGAGCCCTGAATTTATGAACCGAATTGATGAGATACTTCCTTTTG TTCCATTAACGAAAGAAGATATCGTGAAAATAGTTGGCATTCAAATGCGAAGGATTGCCCAGAGATTAAAGGCACGGCGG ATCAATTTATCTTGGGATGATTCTGTAATATTATTTCTTAGTGAACAGGGTTATGACAGTGCTTTCGGAGCCCGCCCTTT AAAACGTTTGATCCAACAAAAAGTTGTGATCTTGCTTTCTAAGGCTTTGCTTAAAGGAGATATTAAACCTGATACATCGA TTGAGTTGACGATGGCAAAAGAGGTGCTCGTATTTAAAAAAGTGGAAACTCCTTCTTAG Protein sequence : MLGVNFMEKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNTAVKDALSREPTVVE GEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQTTKVSFKDLKNLITKIRRGNRMDSPSAE SNFQGLEKYCKNLTALAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGK QLYVLDMGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATT LNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLID EAASLIRMQIGSLPLPIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEK KNSLESMKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVVANWTGIPVQKMLEG EAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDM SEYMEKHSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALF IMTSNIGSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVGIQMRRIAQRLKARR INLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIKPDTSIELTMAKEVLVFKKVETPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CP0629 | NP_445171.1 | ATP-dependent Clp protease subunit B | VFG2084 | Protein | 1e-99 | 41 |
| CP0629 | NP_445171.1 | ATP-dependent Clp protease subunit B | VFG2076 | Protein | 8e-114 | 41 |
