Gene Information

Name : XF1469 (XF1469)
Accession : NP_298758.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 1414818 - 1415672 bp
Length : 855 bp
Strand : -
Note : similar to GI|4959584 (percent identity: 39 %/query alignment coverage: 96.1 %/subject alignment coverage: 97.5 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder/Start codon shift: 90

DNA sequence : 
ATGAGCCGTGCAACATCCGTCCCTGTCCTCATGCACCATCACGTTTCACCATCAACGGGCATGATCTCCGTCTCCCCTGA
ACACTTTGAAAGCCAGATTGCATGGCTGGCGAATGACGGCTGGACCTCACTCACCCTGGAGCAATACGCCGGCTTTCTCG
CCGGTCAACCCGTGCCGCGCAAATCGATCGTAATTACCTTCGACGACGGCTATCTGGATAACTGGGTCTACGCACATCCG
ATCTTGCAGAAATACCACATGCATGCCGTCGTTTTCATTGTCACCAGCTGGATTGGCGATGGCCCAGCGCGTCCCCATGC
TGGACAATCCGGCGCGATATTGCCCATAACGCCAAACCACCATGAGTGCGAAACAGCAATCCTGCATGAGGGGCGCACCG
ACGAAGTGATGCTACGTTGGAGCGAAGTGCAAGCAATGATCGCCGCAGGCACCTTTGAGGCACATTGCCATACACACACC
CATACACGCTGGCTAACACTACAACTCAGCCGCGCCCAACGACGCGAAGGTCTCGACCGAGACCTCATCACCGCACGTAC
AGTACTGCAACAACGCCTAGGCAACGTCTCCAACACACTGTGCTGGCCATACGGCGACTTCGATGCAGACCATATCGAAA
TCGCACGCGCCCATGGCTTTCGCTATTTTCACACCACACATCCCTTTGGACGCAACGTCATTGGCGGCAACCCAGAACAC
ATCTACCGCTTCGCGCTCCGTAACCGCCCGGGGCACTGGCTGCGCAAACGCATCGCGCTCAGCTACCACCCACTCATTGC
ACCATTATTCAACCGCTTCAAAAGCCATAAAAAAGGCATGCAGCCGGGTCCATGA

Protein sequence : 
MSRATSVPVLMHHHVSPSTGMISVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPRKSIVITFDDGYLDNWVYAHP
ILQKYHMHAVVFIVTSWIGDGPARPHAGQSGAILPITPNHHECETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHT
HTRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 2e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XF1469 NP_298758.1 hypothetical protein VFG1040 Protein 1e-41 43