|
Name : secF (XF0226) Accession : NP_297519.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 234900 - 235865 bp Length : 966 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAACTGTTCCCGCTGCATCTCATTCCGAACGACACCAAGATCGACTTTATGCGCTGGCGTCAACTGACGTTGATGTT GATGTCGATACTTTTTGCAATATCAGTCTTGGTTGTCGTTTTTAAGGGATTTAACTATGCGCTGGAATTTACCGGCGGCA CGCTAGTGCGTACTCAGTTCGCAAAGCCTGTGGATGCCGATCAGGTGCGTCAGCGGCTGGAGGTTGGTGGTTTAGGGAAT GCACAGGTACAGAGCGTCGGGGGGGGTAACGAGTTGCTGATTCGCCTGCAGCCGTATGCCGAACATAATAATGATGATGT GGCCAAAAACGCTGCCGAAGCGGTGCGCAAGGTGATTACGTTGCCGGGTAATCCGGCAACCGTACAGCCTGGGGAATTCG TTGGTCCACAGGTGGGCAAAGATCTCGCGATGAATGGTGTATACGCAACGATCTTTATGCTGTTGGGTTTTTTGATTTAT ATCGGGTTTCGGTTTGAGTGGAAGTTTGCGGTCGCAGCCAGTCTAACGGCGTTCTTCGATCTGATTTTGACGATCGCTTA TATGTCGCTGCTTGGTCGGGAGTTCGATTTGACTGTTCTGGCTGGCTTGTTGTCTGTGATGGGTTTTGCGATCAATGACA TCATTGTGGTGTTTGACCGTGTGCGCGAGAACTTCCGTAGCCTGCGTGTGGAGCCGTTAGAGGTGTTGAATCGTTCGATC AATCAGACGCTATCTCGTACGGTGATTACGGCGGTCATGTTCTTTCTGTCGGCGTTTGCGTTGTACTTGTACGGCGGTCG CTCGATGGAGGGGTTGGCTGAAACCCATATGGCTGGTGCGGTGATTGTCGTCGTGTCTTCAGTGGTGATGGCAGTGCCAT TGTTAACCATTGGCCCTTTAAAGGTCAGTAAGCAAGATTTGCTGCCGAAGGCGAAAGACCTGGAGTCACTGGAGCGCCGT CCTTAA Protein sequence : MKLFPLHLIPNDTKIDFMRWRQLTLMLMSILFAISVLVVVFKGFNYALEFTGGTLVRTQFAKPVDADQVRQRLEVGGLGN AQVQSVGGGNELLIRLQPYAEHNNDDVAKNAAEAVRKVITLPGNPATVQPGEFVGPQVGKDLAMNGVYATIFMLLGFLIY IGFRFEWKFAVAASLTAFFDLILTIAYMSLLGREFDLTVLAGLLSVMGFAINDIIVVFDRVRENFRSLRVEPLEVLNRSI NQTLSRTVITAVMFFLSAFALYLYGGRSMEGLAETHMAGAVIVVVSSVVMAVPLLTIGPLKVSKQDLLPKAKDLESLERR P |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 7e-41 | 45 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 3e-41 | 45 |
