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Name : XF2397 (XF2397) Accession : NP_299676.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Virulence Product : toxin secretion ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2271534 - 2273696 bp Length : 2163 bp Strand : + Note : similar to SP|P10089 (percent identity: 61 %/query alignment coverage: 96.9 %/subject alignment coverage: 98.7 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder/Start codon shift: 21 DNA sequence : ATGACATACAAAAGTCCCCTTGTAACGCAACAGAACCAAGGCGCTTCCAATCCACAGCCTGACAGCGCACTCCACGGCTT AGTGCTCCTTGCCCAATTCCATGGCATTGCGGCTGACCCCATACAGATAGCGCATGACTTCGGGCGCAGTGGCGAACTAT TCGATGAAACAACCTTGCTACTGGCCGCCAAAAAACTCGGACTAAAAGCCAAAGTCGTCACCCAACCGGTCACCCGTATC GCAATGGCCGCATTACCTGCACTCGCACTGATCCCTGGAGGAACAGCATTTATCGTCGCCAAAGTGACAGGCAACCAGAT ACTGATCCACGACCTGGCAGATCAACGGCCACGCACAATCTCACACGATGAATTTACCGCACGCTACGCCGGTCGCTTAC TCCAAGTCGCCTCCCGCGCATCGGTCCTAGGAAATCTGGCTAAATTCGACTTTAGCTGGTTCATCCCCGCAGTGGTCAAA TATCGCAAACTGCTGGCTGAAGTCTTTGCAGTGTCCTTATTTATCCAGATATTCGCACTGGTGACACCCCTGTTCTACCA AGTCGTGATGGACAAAGTGCTCGTACACCAAGCACTCAGCACCCTTGAAGTCATTGTCGTTGGCCTGATCTCCCTGGCCT TATTCGAAGTACTGCTCACCACACTACGCACCCATGTCTTCGCACATACCACCAGCAAAATTGATGTTGAACTCGGCGCC CGCTTATTCCGCCATCTATTAGCACTCCCCTTAGCGTATTTTGAATCGCGCCGCGTTGGCGACACCATCGCCCGCGTACG CGAACTAGAAAACATCCGCCACTTCCTCACCGGCCAAGCACTGACCTCCGTCTTAGACCTCCTATTCACCGTCGTCTTCT TGTCCGTCATGTTTTGGTACAGCAGCTGGCTCACCCTGATTGTGGTGATCTCATTACCCCTGTACGCACTGATCTCCGCA TTCATCACCCCAGTACTCCGCAAACGTCTGGATGAAAAATTTGCACGCGGCGCAGACAACCAAGCATTTTTAGTAGAAAC AGTCAGCGGCATTGGCACCGTTAAAGCAATGGCCGTAGACCCACGTGTCACCCGCACCTGGGACAACCAACTGGCGGGCT ACGTTGGCGCCAGCTTTAGCGTTACCAAAATTGCCACCCTCGGCCAACAGAGCGTTCAATTAGTACAGAAACTGACCAAC GTCGCCGTATTATTTTGGGGCGCCAAACTGGTGATTGACGGACAACTGTCCCTCGGACAACTGATTGCCTTCAACATGTT GTCCGGCCAAGTCACTGCCCCCATCATCCGGCTCGCCCAGCTATGGCAGGATTTTCAACAAGTCGGACTTTCGGTCGAAC GACTGGGCGAAATCCTAAATACCCGTACCGAACTCCCCGGCAGCCGCATGACATTGCCGCCCATCCAAGGGCGCATCACC TTCGAACGCCTCATCTTCCGCTACCGTCCAGATACCCCCGACGTACTCGCCGGAATCGACCTAGACATCCAACCTGGCGA AGTCATCGGCATCGTAGGACGCTCCGGCTCTGGGAAAAGCACCCTGACAAAACTCGTACAGCGCATGTACGTCCCAGAGC GCGGCCGCGTTTTGGTCGACAGCCACGACCTCTCATTGGCCGATCCAGCCTGGCTGCGTCGCCAAATTGGCGTCGTACTG CAAGAAAATTTCCTGTTCAACCGCAGCGTCCGTGAAAACATCGCCATGGCCGACCCGGGAATCCCATTGGAACGCGTCAT CCACGCAGCAACATTAGCCGGTGCCCATCCCTTCATTGCTGAACTGCCAGAAGGCTATGACACCAAGATTGGCGAACACG GTACAGGACTCTCCGGCGGCCAACGCCAACGCATCGCCATTGCCCGCGCCCTGATTGGCGACCCACGCATCCTTATTTTC GATGAAGCCACCAGCGCACTCGACTACGAATCAGAACATGCCGTCATGCAAAACATGCGAGCCATTTGCAAAGGCCGCAC CGTTCTCATCATCGCCCACCGCCTCTCCACAGTCCGCAATGCCGATCGTATCGTCGTCATTGATAAAGGAAAAATCGTAG AAAGCGGCTCCCACGAAACACTCCTCAACCGCAACAACGGTCATTACGCCCACCTCTACCGACTCCAACAAGGGACCACA TGA Protein sequence : MTYKSPLVTQQNQGASNPQPDSALHGLVLLAQFHGIAADPIQIAHDFGRSGELFDETTLLLAAKKLGLKAKVVTQPVTRI AMAALPALALIPGGTAFIVAKVTGNQILIHDLADQRPRTISHDEFTARYAGRLLQVASRASVLGNLAKFDFSWFIPAVVK YRKLLAEVFAVSLFIQIFALVTPLFYQVVMDKVLVHQALSTLEVIVVGLISLALFEVLLTTLRTHVFAHTTSKIDVELGA RLFRHLLALPLAYFESRRVGDTIARVRELENIRHFLTGQALTSVLDLLFTVVFLSVMFWYSSWLTLIVVISLPLYALISA FITPVLRKRLDEKFARGADNQAFLVETVSGIGTVKAMAVDPRVTRTWDNQLAGYVGASFSVTKIATLGQQSVQLVQKLTN VAVLFWGAKLVIDGQLSLGQLIAFNMLSGQVTAPIIRLAQLWQDFQQVGLSVERLGEILNTRTELPGSRMTLPPIQGRIT FERLIFRYRPDTPDVLAGIDLDIQPGEVIGIVGRSGSGKSTLTKLVQRMYVPERGRVLVDSHDLSLADPAWLRRQIGVVL QENFLFNRSVRENIAMADPGIPLERVIHAATLAGAHPFIAELPEGYDTKIGEHGTGLSGGQRQRIAIARALIGDPRILIF DEATSALDYESEHAVMQNMRAICKGRTVLIIAHRLSTVRNADRIVVIDKGKIVESGSHETLLNRNNGHYAHLYRLQQGTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 62 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 62 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XF2397 | NP_299676.1 | toxin secretion ABC transporter ATP-binding protein | VFG1501 | Protein | 0.0 | 62 |
| XF2397 | NP_299676.1 | toxin secretion ABC transporter ATP-binding protein | VFG0907 | Protein | 0.0 | 62 |
| XF2397 | NP_299676.1 | toxin secretion ABC transporter ATP-binding protein | VFG1557 | Protein | 0.0 | 62 |
| XF2397 | NP_299676.1 | toxin secretion ABC transporter ATP-binding protein | VFG0841 | Protein | 0.0 | 61 |
| XF2397 | NP_299676.1 | toxin secretion ABC transporter ATP-binding protein | VFG1269 | Protein | 0.0 | 59 |
