|
Name : XF2461 (XF2461) Accession : NP_299740.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : c-type cytochrome biogenesis protein/thioredoxin Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0526 EC number : - Position : 2346882 - 2347475 bp Length : 594 bp Strand : + Note : similar to SP|P33926 (percent identity: 39 %/query alignment coverage: 87.8 %/subject alignment coverage: 93.5 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGTCTGATTCACCCCGCCGCTTTCCCACCCCGCTGCTCCTTACAGGTGTCATGGGAGTGCTGATCCTGATCGCACTGCT CACCTTCACATTAATGCGCTCCTGGGATAACGCACCGGACCAATCGGCACTGCTCGGGAAACCAGCGCCAAACTTCTCAC TCCCACTGCTGCATGACCCATCACTGCAAATCAGCAACACCGACTTGGCCGGTGCCCCCTACCTGCTGCATGTCTGGGGC AGCTGGTGTGCCGCCTGCGCCACCGAACAGCCCGTACTGACGCACTTTGCACTCAGCAAACGGGTACGCGTGATTGGCTA CAACTGGAAAGACCGGCGGGAAGATGCCTTGCAATGGCTCGAACAACTCGGCAACCCGTATCTGGCCGTGGTGTCTGATC CAGAAGGCAAAACGGCTATGGATTGGGGCGTGACCGCCGCACCAACAACATTCTTGATTGACGGACGCGGGATCGTACGC TGGCATCACAAAGGCGCCCTGAATCAGCAGATAATCGAACACAAACTATTACCGATCCTTGCCGATATCGAACACTCACC CACCGCCGCACCCGCATTGCATCAGGCACCATGA Protein sequence : MSDSPRRFPTPLLLTGVMGVLILIALLTFTLMRSWDNAPDQSALLGKPAPNFSLPLLHDPSLQISNTDLAGAPYLLHVWG SWCAACATEQPVLTHFALSKRVRVIGYNWKDRREDALQWLEQLGNPYLAVVSDPEGKTAMDWGVTAAPTTFLIDGRGIVR WHHKGALNQQIIEHKLLPILADIEHSPTAAPALHQAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmG | YP_217240.1 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | Not tested | SPI-12 | Protein | 2e-23 | 45 |
