|
Name : XF2476 (XF2476) Accession : NP_299754.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : extragenic supressor Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0483 EC number : - Position : 2359411 - 2360238 bp Length : 828 bp Strand : + Note : similar to SP|P22783 (percent identity: 44 %/query alignment coverage: 93.5 %/subject alignment coverage: 96.3 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGCAGAAACCCGCGGTTAACATCATGGTCAAAGCCGCTCGTTCCGCCGGCAACGTCCTATTGCGACACATCAATAAATT AGAAACGCTGCATGTCATCCAAAAAAGCCGTATGGACTATGCCAGCGACGTGGATGAGATGGCTGAAAAGGTCATTGTCA AGGAACTCAAGCGGGCCTATCCGGAGTACGGCATTCTCGGCGAGGAAGGGGGACTGCAGGGCAATCATCGGATCATGTGG GTGATTGATCCACTGGACGGTACCAGTAACTACTTGCGTGGTTTCCCTCATTACTGCATCTCCATCGCTTTGGTCGAAAA CGGTGAACCAACAGATGCTGTCATTTTTGACCCGCTGCGCAACGAGCTGTTCACTGCCAGCCGTGGCGCTGGTGCAATCC TCAATGAACGCAAGATCCGCGTGGCGAACCGTAAAGATTTGAACGGTACGATGCTGAACACCGGTTTCTCACCACGGGAA CGCAGCCGTGCTCATGCGCAGTTGAAATGTGTGGATGCGTTGCTGATGCAGGCCGAAGATATCCGCCGTAGCGGTTCGGC CGCTCTGGACTTGGCCTACGTTGCTTGTGGCCGTGCAGATGCTTACTTCGAGGCTGGAATAAAGGTGTGGGATGTCGCTG CGGGAATGTTGTTAGTCCGCGAAGCCGGGGGTTACGTATGCGACTTCAAGGGTGCTGATGCGCCCCGCATGGATGATAAA GGACCGGAGAGCTGCCAGTTGGTCGCAGGCAATATCAAAGTGGCCCACGCGCTGCAACAAGTCATTGTCAGCAGTGGTTA CGGGCGGGAGTTCGATCCGAAGCGCTGA Protein sequence : MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPEYGILGEEGGLQGNHRIMW VIDPLDGTSNYLRGFPHYCISIALVENGEPTDAVIFDPLRNELFTASRGAGAILNERKIRVANRKDLNGTMLNTGFSPRE RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK GPESCQLVAGNIKVAHALQQVIVSSGYGREFDPKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| suhB | AAT96064.1 | SuhB | Not tested | T-PAI | Protein | 4e-50 | 47 |
