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Name : XF0381 (XF0381) Accession : NP_297671.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 391356 - 393941 bp Length : 2586 bp Strand : + Note : similar to SP|P03815 (percent identity: 69 %/query alignment coverage: 99.5 %/subject alignment coverage: 100.0 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGCGGATGGATAAGCTTACTTCGCGTTTCCAGAATGCGTTGGCTGATGCGCAATCGCTGGCCGTCGGTCGTGACCATAC TATTATTGAGCCGGTGCATGTTTTTTCGGCATTGCTTGATCAGCAGGGGGGGAGTACACGTCCGTTGCTCATGCAGGCCG GTGTCAATGTGCCATTGCTGCGTGAGCGGTTGACCGAGATACTTGAGGCATTGCCGAAAGTGAGTGGTCAGACGGTTAAT GTCTCACCCAGCAATGAATTGAGTCGTTTGTTTCATCGGACTGATAAGTTAGCGCAGCAGCATGGCGATCAGTTTATGGC CAGTGAGTGGTTCGTGTTGGCTGTGGTCGATGATAGTGGGGGGCTGGGCCAGGCGTTGCGTGCTGCTGGTGCGGAAAAAA AGAAGATTGAGGCTGCGATTGATAAATTGCGTGGCGGTGAAACTGTCCAGACTGAGAATGCGGAGGAGCAGCGTCAAGCG TTGGAAAAGTACACGATTGATCTGACTGCCAGGGCTGAGAGTGGCAAGCTTGATCCGGTGATTGGTCGCGATGAGGAAAT TCGCCGCACGATACAGGTATTGCAGCGGCGTACAAAAAATAATCCTGTGCTGATTGGTGAGCCGGGTGTGGGTAAAACTG CCATTGTAGAAGGGCTGGCTCAGCGCATTGTCAATGGTGAGGTTCCGGAAGGGTTGCGCAGTAAGCGTCTGCTCTCGCTG GATTTGGGAGCGTTGATTGCTGGGGCCAAGTTTCGTGGTGAGTTTGAGGAGCGCTTGAAGGGGGTGCTTAACGATCTCGC TAAGAATGAGGGGCGGGTCATTTTGTTCATTGACGAGCTGCATACCATGGTTGGTGCCGGTAAAGCCGATGGTGCGATGG ATGCTGGCAATATGCTCAAGCCGGCGTTAGCACGTGGTGAGTTGCATTGTATCGGTGCGACTACGTTGGATGAGTATCGC AAGTACATTGAGAAGGATGCGGCGTTGGAACGCCGTTTCCAGAAGGTGTTTGTTGGGGAGCCGACGGTGGAGGATACCAT CGCAATTCTTCGTGGACTTAAGGAAAAGTATGCGTTGCACCACGGTGTGGAAATCACTGATCCGGCTATTGTTGCTGCGG CTACGCTGTCTAATCGCTACATCACTGATCGTCAGTTACCAGATAAAGCGATTGACTTGATGGATGAGGCTGCCAGTCGT ATTCGTATGGAAATTGACTCCAAGCCGGAAGAGCTTGATCGTTTGGAGCGTCGGTTGATTCAGTTGAAAATTCAGCGTGA GATGCTGAAGAAAGAAAAGGATGAGGCGAGCAAGCAGCGTTTAGCCGATCTTGAGCGTGATATTGAGGTTCTGGACCGTG AATTTTCCGATCTGGAGGAGGTGTGGAGATCAGAAAAAGCCGCGCTACAGGGGGCGACTAAGATCAAGGAGTCGATCGAG CAGGCCAAGCTTGATTTGGAAGCCGCGCAGCGCCGTCAGGACTACGCCAAGATGAGCGAGATTCAGTATGGTGTACTCCC CGCGTTGGAGAAGCAGCTGGTGGCAGCAAGTCAGGCGGAACAGCACGATTTTACGTTGGTGCAGGAGAAAGTGACTGCTG AGGAGATTGCCGAGGTAGTCAGTCGTTGGACTGGTATTCCAGTGAGCAAGATGCTTGAGGGCGAGCGCGATAAGTTGTTG CGTATGGAAGCTGATCTAGGCCGACGTGTGGTTGGTCAAGAGGAGGCGATCAAGGTGGTATCGGATGCGGTACGCCGTTC GCGTACTGGTTTGTCTGATCCAAATCGACCGAGCGGCTCGTTCCTTTTTCTGGGTCCGACGGGTGTTGGTAAGACTGAGT TATGTAAGGCGCTGGCTGAATTTTTGTTCGACAGTCAAGATGCAATGGTCCGCATTGATATGAGTGAGTTCATGGAAAAG CATTCTGTGGCGCGCCTGATTGGTGCGCCTCCGGGCTATGTGGGTTATGAGGAAGGAGGTTATCTTACTGAATTGGTGCG ACGTCGGCCTTACTCTCTGATTCTTTTGGATGAAGTGGAGAAGGCGCATAGTGATGTGTTCAATATTCTGCTGCAAGTAC TTGATGATGGACGCTTGACTGATGGTCAGGGCCGTACTGTTGATTTTCGCAATACCGTTATTGTGATGACATCGAACTTG GGTTCACATCAGATCCAAGAACTCAGTGGAGACGATTCTCCGGAGGTGTATACGCAAATGAAGGCGGCAGTGATGGAGGT GGTGCAGGCGCATTTTCGCCCAGAGTTCATTAACAGGTTGGATGATATTGTTGTTTTCCACCCGTTGGACAAGGCGCAAA TCAAGCAGATTGCGCGGATTCAACTGCAGGGGCTTGAGAAGCGTCTCGCTGAATCTGAGTTGAAACTAGATTTGGATGAT CGTGCGTTGGAATTGCTTGGTAATGTCGGATTTGATCCTGTATATGGTGCCCGCCCGCTGAAGAGAGCGATCCAATCTCA GCTGGAGAATCCCTTAGCGCAGCAGATCTTAGCTGAAGCGTTCGTCAGTGGAGATACTGTGCAGGTGGGTGTTGATGGAG GGAAGCTTGTATTCGCTAAGGTGTGA Protein sequence : MRMDKLTSRFQNALADAQSLAVGRDHTIIEPVHVFSALLDQQGGSTRPLLMQAGVNVPLLRERLTEILEALPKVSGQTVN VSPSNELSRLFHRTDKLAQQHGDQFMASEWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRGGETVQTENAEEQRQA LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSL DLGALIAGAKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASR IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIE QAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEGERDKLL RMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTELVRRRPYSLILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL GSHQIQELSGDDSPEVYTQMKAAVMEVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDLDD RALELLGNVGFDPVYGARPLKRAIQSQLENPLAQQILAEAFVSGDTVQVGVDGGKLVFAKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-106 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-101 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XF0381 | NP_297671.1 | ATP-dependent Clp protease subunit | VFG0080 | Protein | 1e-126 | 46 |
| XF0381 | NP_297671.1 | ATP-dependent Clp protease subunit | VFG2076 | Protein | 2e-112 | 41 |
