Gene Information

Name : VC1142 (VC1142)
Accession : NP_230787.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1211976 - 1212206 bp
Length : 231 bp
Strand : -
Note : similar to SP:P24245 GB:U00096 PID:1651400 PID:1787107; identified by sequence similarity

DNA sequence :
ATGTATAGCATGGCTACAGGTACAGTGAAATGGTTTAATAATGCCAAAGGCTTCGGTTTTATTTGCCCGGAAGGTGAAGA
CGGAGATATTTTCGCTCATTACTCAACCATTCAGATGGACGGATACCGTACACTCAAAGCCGGTCAACAGGTTTCTTATC
AGGTGGAGCAAGGTCCTAAGGGATACCACGCGAGCTGTGTTGTGCCAATCGAGGGACAATCAGCAAAATAG

Protein sequence :
MYSMATGTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQVSYQVEQGPKGYHASCVVPIEGQSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-14 50