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Name : potB (VC1427) Accession : NP_231070.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1524945 - 1525805 bp Length : 861 bp Strand : - Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGATGAGCAAAAAGCTTAATCTACAAAATGCGATTGTTACCTTAATCGTAGGTTGGTTAGTGCTGTTTGTACTGATCCC CAACCTGATGATTATTGGTACGAGTTTTCTGACTCGTGATGAAGCGAACCTGATTAAGTTTGCATTCACCTTTGAAAACT ACACGCGTCTGCTTGATCCACTATACGGAAAAGTGATGCTGCACTCGTTCTACATGGCGATTGTTGCAACATTAATCTGT CTAGTGATTGGTTATCCTTTTGCGTACATAGTGGCGAAAATGCCTGAAAAATGGCGTCCATTTATGCTGTTTTTGATTAT TGTTCCTTTCTGGACCAACTCACTCATCCGCACCTATGGTTTAAAAATCGTACTCGGCACGCAAGGTATTCTTAATCAAG CGCTAATGTCTCTGGGCCTTATTGATGCACCACTGCGCATTATGTTTACCGAAACAGCCGTCATGATCGGTCTGGTTTAC ATTTTGTTGCCATTTATGATCCTTCCGCTCTATTCGGCTATCGAAAAATTGGATGGCACTTATATTGAAGCGGCGCGCGA TCTCGGTGCCAACAAGTTTCAAACTTTGGTTCGCGTGATTTTACCGCTGACTATGCCTGGCATTATTGGTGGTTGTTTGC TAGTTCTGCTCCCTGCCCTCGGTATGTTCTACATCGCTGACCTACTCGGCGGTGCGAAAAACCTGCTGATCGGTAACGTG ATTAAGAGCCAAGTACTCAACGCCCGTGACTGGCCATTTGGTGCCGCAACCAGTATTGCACTGACTCTGGCCATGGCGAT CATGCTGTACGCCTACTATCGTGCAGGTAAACTTTTGAATAAGAAGGTGGAGCTAGACTAA Protein sequence : MMSKKLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPLYGKVMLHSFYMAIVATLIC LVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVY ILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNV IKSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGKLLNKKVELD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 1e-90 | 70 |
