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Name : VCA0116 (VCA0116) Accession : NP_232517.1 Strain : Genome accession: NC_002506 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 126178 - 128787 bp Length : 2610 bp Strand : + Note : similar to GB:M29364 SP:P03815 GB:V00350 GB:X57620 PID:1236633; identified by sequence similarity DNA sequence : GTGATCCGTATTGAATTACCCACTCTTATTGCAAAACTGAATGCACAAAGCAAATTGGCTCTGGAGCAAGCTGCCTCTCT CTGTATTGAGCGCCAACACCCTGAAGTCACTCTAGAATATTATCTGGATGTGTTACTGGATAATCCCCTCTCTGATGTGC GTCTCGTACTCAAGCAAGCGGGGCTGGAAGTCGATCAGGTGAAACAGGCCATCGCATCAACCTATAGCCGTGAACAGGTC TTGGATACCTATCCAGCGTTTTCGCCACTGCTGGTCGAGTTACTGCAAGAAGCTTGGCTGCTTTCCAGTACCGAGTTAGA GCAGGCTGAGCTGCGTTCAGGGGCGATTTTCTTAGCCGCGCTGACCCGTGCGGACCGTTATCTGTCATTCAAATTGATCA GTTTGTTTGAAGGCATCAACCGCGAAAACCTCAAAAAACACTTTGCGATGATCTTAAGTGATTCTGCAGAAACCGCAGTG GCTAAAACAGACAAAAATGCGGCCAATCCACTGCAAGCCGCCGCAGAAACACCACTCGGACGCTTTTGCACGAATGTGAC TGAGCAAGCCCGTAACGGTGAGCTTGATCCTGTCCTGAGCCGTGAAAATGAACTCAACTTGATGGTGGATATTCTGTGCC GTCGCCGCAAAAACAACCCGATTGTGGTGGGTGAAGCAGGTGTTGGTAAAAGTGCCATGATTGAAGGTTTGGCGCTGCGT GTGGTGGCTGGCAAAGTGCCCACCCAACTGCAAAATGTAGAACTCTATTCGTTGGATCTTGGTCGCTTGCAAGCGGGTGC ATCGGTGAAAGGCGAGTTCGAAAAGCGCCTAAAAGGGGTGATTGATGCGATTAAGCAATCGCCTAAACCGATCATTTTAT TCATCGATGAAGCGCACACCTTAATTGGTTCTGGTAACCAAGAAGGGGGCAGTGATGCGGCAAACTTGCTCAAGCCTGCG CTGGCGCGTGGTGAGTTAAGCACAGTGGCGGCGACGACGTGGAAAGAGTACAAAAAGTATTTTGAAAAAGATCCCGCGCT GACGCGCCGTTTCCAACTGGTCAAACTCGATGAACCAACGATCGATCAAGCCGTCGATATTCTGCGCGGTCTTAACAGTG TCTATGAAAAGGCACACAACGTACTGATCACTGATGATGCACTAAAAGCTGCCGCTGAACTGTCAGCGCGTTACATCTCA GGTCGTCAACTGCCCGATAAAGCGATTGATGTGCTGGATACCGCTTGTGCGCGGATTGCGATCAATATGACCACGCCACC TAAGCGTTTAGCGCTACTTGAAACCTTGTGCCATCAGCGTCAACTCGAAATTGACATGCTAGAGCGGGCGCAATTCCTTG GCCAAGAGGTCGATAGCGAGCGCCTCGATGTTTTGCGTAATCAAGAGTTGGCCGATGAAGCGGAAAAAGCCGCGTTGACA CAGAGTTGGCAGCAGCAAAAAAGCTTGGTGGAGTCGATCATCGCACTGCGTGCTGAGCTGATGGAGTTAAGCCAAGCGCA AGAGCAAGATCCCGACCATTTATTGGTGGTGCGTACGGCGCTGCAAGAGCAGTATCAAGCACTCGATGCGATTGATCATG CTGAGCGCTTGATGCACCCGCAAGTCGATGCGGATCAGATTGCTGAAGTGATCGCCGATTGGACGGGCGTGCCTGTTGAT CAGATGAACACCGATGAGCTGCATAAAATCACCCATTTGACCTCGATTTTAGGCCAAGCGATCAAAGGCCAAGAAACGGC CATCGAACGTATCCATCGTCACTTACTGACAGCGCGTGCCGATCTGCGTCGTCCGGGACGTCCGAAAGGGGCATTCCTGC TGGTGGGGCCAAGCGGTGTAGGTAAAACCGAAACGGTAGTGCAACTGGCAGAGCAGCTTTACGGTGGTAAACAGTTCCTC ACCACCATCAACATGTCGGAATACCAAGAGAAACACACCGTTTCCCGCCTGATTGGTTCACCTCCGGGTTATGTTGGCTA CGGTGAAGGCGGTGTGCTGACGGAGGCTATCCGTAAGATGCCTTATTCGGTGGTTCTGCTTGATGAAGTCGAAAAAGCCC ATCCAGAAGTTTTAAATATCTTCTACCAAGGCTTTGATAAAGGCGAAATCGCCGATGGTGAAGGTCGTGTCATCGACTGC CAAAACATCGTGTTCTTCCTGACATCGAACTTAGGCTACCAAACCATAGTCGATTATGCCGATGAGCCCGCCAAGCTTGA TGAAGCGCTTTATCCTGAATTGGCCGCTTTCTTTAAACCTGCTCTGCTGGCGCGTATGGAAGTGATCCCTTACCTACCAC TGGGTAAAGAAGTGTTGGCACAGATTGTTCGCGGCAAGCTGGCTCGTCTCGAGAAACTGTTCAAGACACGTTACAACGCA GAAGTGGTGATTGAAGAGAGCTTAATTGACGAAATCTTAAGCCGTGCGACACGCAGCGAAAACGGTGCGCGTATGCTGGA GGCGATCATTGAAGGGCAATTGCTGCCGCCCGTTTCATTGGCGCTGCTGAATAAACTCGCCGAGAGAGCGCCCGTTGAGC GCATTCGTTTAGCGGCAGAAGCGGGTGAATTTATCGGAGAGGTAGCGTAA Protein sequence : MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSREQV LDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAV AKTDKNAANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALR VVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPA LARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYIS GRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALT QSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVD QMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFL TTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDC QNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNA EVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEAGEFIGEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 57 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 57 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-133 | 41 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCA0116 | NP_232517.1 | clpB protein | VFG2084 | Protein | 0.0 | 100 |
| VCA0116 | NP_232517.1 | clpB protein | VFG2076 | Protein | 1e-143 | 43 |
