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Name : ccmF (PA1480) Accession : NP_250171.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1605088 - 1607061 bp Length : 1974 bp Strand : + Note : Product name confidence: class 2 (High similarity to functionally studied protein) DNA sequence : ATGATCCCCGAACTCGGCCACCTGGCCCTGATCCTCGCCCTTTGCCTGGCCCTGGTGCAGTCGAGCCTGCCGCTGGTCGG CGCCTGGCGCGGCGACCGCCAGTGGATGAGCCTGGCGCGCCCGGCGGCCTGGGGGCAGTTCGCCTTCCTCGCCTTCGCCT TCGGCTGCCTGACCTGGGCCTTCCTGCGCGACGACTTCTCGGTGGCCTACGTGGCCGGCAACTCCAACAGCGCGCTGCCC TGGTACTACAAGTTCAGCGCCGTCTGGGGCGCCCACGAAGGTTCGCTGCTGCTCTGGGCGCTGATCCTCGGTGGCTGGAC CTTCGCCGTGTCGATCTTCTCCCGGCAACTGCCGGAGGTCATGCTGGCCCGCGTGCTGGCGGTGATGGGCATGATCAGCA CCGGCTTCCTGCTGTTCCTGATCATCACCTCCAACCCGTTCAGCCGCCTGCTGCCGCAGACCCCGATGGACGGCAACGAC CTCAACCCGCTGCTGCAGGACGTCGGCCTGATCGTCCACCCGCCGATGCTCTACATGGGTTACGTCGGATTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCACTGCTCGGCGGCCGCCTGGACGCCGCCTGGGCGCGCTGGTCGCGGCCCTGGACCCTGG TAGCCTGGGCCTTCCTCGGTATCGGCATCGTGCTCGGCTCCTGGTGGGCCTACTACGAGCTGGGCTGGGGGGGCTGGTGG TTCTGGGATCCGGTGGAAAACGCCTCCTTCATGCCCTGGCTGGTCGGCACTGCACTGATCCACTCGCTGGCGGTGACCGA GAAGCGCGGCGTGTTCAAGAGCTGGACCGTGCTGCTGGCGATCGCCGCTTTCTCCCTGAGCCTGCTGGGCACCTTCCTGG TCCGCTCCGGCGTGCTCACCTCGGTGCACGCCTTCGCCTCCGACCCGGAGCGCGGGGTGTTCATCCTCGCCTTCCTGCTG CTGGTGGTCGGCGGCTCGCTGACCCTGTTCGCCCTGCGCGCGCCGGTGGTCAAGAGCCAGGTCGGCTTCGCCCTGTGGTC GCGCGAGACCCTGCTGCTGCTGAACAACCTGGTGCTGGTGGTGGCGGCCTCGATGATCCTCCTCGGGACCCTCTACCCGC TGCTGCTCGATGCCCTCAGCGGCGCCAAGCTGTCGGTCGGCCCGCCGTACTTCAACGCCATGTTCCTGCCGCTGATGGCG GCGCTGATGGCGGCGCTGGCGGTCGGCGTGCTGGTGCGCTGGAAGGACACCCCGAGCCGCTGGCTGCTCGGCATGCTGAC CCCGGTGCTGGCGGCCAGCGCGGTCCTGGCGGCGGCCGGTTCGATGTACTTCGGCGATTTCAACTGGGCGGTGCTGGCGG TGTTCCTGCTGTCCGCCTGGGTGGTCCTGGCCGGTTTCCGCGACTTCCTCGACAAGACCCGGCACAAGGGCGTGCTGGCC GGCGCCCGCAGCCTGACCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCATCGCCGTGTGCGCCATCGGCATCGT CCTCAGCAGCCAGTACAGCGCCCAGCGTGACCTGCGCATGTCGCCCGGCGACACCGTCGAACTGGGCGGCTACCACTTCC TCTTCGACGGCGCGAAGCACCACGAAGGGCCGAACTACACCTCGGACAAGGGCAGCATCCACGTCAGCCGCGACGGCAAG GAGATCGCCACCCTGCATCCGGAGAAGCGCCTGTACACCGTGCAGAGTTCGATGATGACCGAGGCAGGGATCGATGCCGG CTTTACCCGCGACCTCTACGTGGCGCTCGGCGAGCCGCTGGAGAACGGTGCCTGGGCGGTGCGCGTGCACGTCAAGCCGT TCGTCCGCTGGATCTGGTTCGGTGGCCTGCTGATGGGCCTCGGCGGCGCCCTGGCGGCGCTCGACCGGCGCTACCGGGTG AAGGTGAAAACACGTGTGCGCGAGGCCCTGGGCCTCGCCGGTCAGGGAGCCTGA Protein sequence : MIPELGHLALILALCLALVQSSLPLVGAWRGDRQWMSLARPAAWGQFAFLAFAFGCLTWAFLRDDFSVAYVAGNSNSALP WYYKFSAVWGAHEGSLLLWALILGGWTFAVSIFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQTPMDGND LNPLLQDVGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFILAFLL LVVGGSLTLFALRAPVVKSQVGFALWSRETLLLLNNLVLVVAASMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLMA ALMAALAVGVLVRWKDTPSRWLLGMLTPVLAASAVLAAAGSMYFGDFNWAVLAVFLLSAWVVLAGFRDFLDKTRHKGVLA GARSLTRSYWGMQLAHLGIAVCAIGIVLSSQYSAQRDLRMSPGDTVELGGYHFLFDGAKHHEGPNYTSDKGSIHVSRDGK EIATLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHVKPFVRWIWFGGLLMGLGGALAALDRRYRV KVKTRVREALGLAGQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-132 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-121 | 57 |
