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Name : PA4896 (PA4896) Accession : NP_253583.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 5490645 - 5491181 bp Length : 537 bp Strand : - Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGAATGCGCCGAGTTCCTGCCTGTCCGCGGACCGCGACGGCGTCGCCACGCTCTACCGTGAAAACCATGCCTGGCTGCG CAACTGGCTGGCCTACCGACTCCGCTCCTGGGGACGCGGCGTGGCCGACGACCTGGCCCATGACACCTTCCTGCGCATTC TCGCCAGCCGCGACGGCGGCCAGCGTGAAGCGATCCGTCAGCCGCGCGCCTATCTCACCCGTATCGCCAACTGCGTGCTG GTCAGTTGGCGCCGTCGCCAATCGCTGGAACTTGCCTGGCTGGAGGCCCTGGCCACGCTGCCCGAGCCGTTGCAGCCGTC GCCGGAACAACAGAGCGTGATCGTCGAGACCCTGCACGAGATCGACGCGCTGCTCGACACCCTGCGCCCGCGGGTGAAAC AGGCATTCCTGATGGCGACGCTGGACGGCATGAAGCAGAAGGACATCGCCCAGGCGCTGGGCGTCGCGCTGCCGACGGTG AAGAAGTTCATCCACCAGGCCTACGTGACCTGCCTGAGCCTGATGCCCGATGAATGA Protein sequence : MNAPSSCLSADRDGVATLYRENHAWLRNWLAYRLRSWGRGVADDLAHDTFLRILASRDGGQREAIRQPRAYLTRIANCVL VSWRRRQSLELAWLEALATLPEPLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMKQKDIAQALGVALPTV KKFIHQAYVTCLSLMPDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 9e-19 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PA4896 | NP_253583.1 | RNA polymerase sigma factor | VFG1049 | Protein | 4e-19 | 43 |
