Gene Information

Name : ysaC (L192122)
Accession : NP_267906.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1808771 - 1809550 bp
Length : 780 bp
Strand : -
Note : transport and binding protein

DNA sequence : 
ATGTTACTCGAAGTAAAACATCTCAAGAAAATTTTTAAAACAAGATTTTCAAAAGAAGAAACCACAGCCCTAGTTGACAT
TGATTTTGGTGTAGAAGAAGGCGAATATATTGCCATTATGGGGGAATCTGGTTCAGGAAAAACAACCTTGTTGAATATCC
TATCAACTCTTGAAAAACCAACTTCTGGACAAGTACTCTTAAATAAAGAAGACATTACGGCTATTAAAGATAAAGAAATT
TCTGCATTTAGACGTGATCATCTCGGTTTTGTCTTTCAAGATTTCAATTTACTTGATACCCTTAACGTCAGAGACAATAT
TTACCTTCCACTCGTTTTATCAAAATCAAGCGTTGAATTAATGAAGAGTAGACTAAAAATTCTCGCACCTAAACTAAACA
TTGAAAATCTCTTAAAAAAACAACCTTTTGAACTTTCAGGAGGACAAAAACAGCGGGTTGCTGTAGCACGTGCCTTGATT
AGCCAACCTGATTTAGTTCTTGCCGATGAACCCACAGCTGCTTTGGACTTTAAAAACTCAGAAGACTTACTCAACCTTTT
TGAAGAAATTAATGATAGTGGTCAAACCATTATCATGGTTACTCACTCAAGTTTAGCTGCAAGCCATGCGAAACGTGTTC
TTTTTATAAAAGACGGTGTTCTTTACCATCAACTTTATCGTGGTGAAAAAAGCTCAACTGAATTTGCAAAAGAAATTACT
CTTTCAATGATTGCTTTCTTGGGAGCATCAGAGGATGAGGAGGTGTCCTTAAATGCTTAG

Protein sequence : 
MLLEVKHLKKIFKTRFSKEETTALVDIDFGVEEGEYIAIMGESGSGKTTLLNILSTLEKPTSGQVLLNKEDITAIKDKEI
SAFRRDHLGFVFQDFNLLDTLNVRDNIYLPLVLSKSSVELMKSRLKILAPKLNIENLLKKQPFELSGGQKQRVAVARALI
SQPDLVLADEPTAALDFKNSEDLLNLFEEINDSGQTIIMVTHSSLAASHAKRVLFIKDGVLYHQLYRGEKSSTEFAKEIT
LSMIAFLGASEDEEVSLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ysaC NP_267906.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-38 46
ysaC NP_267906.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 45
ysaC NP_267906.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-36 42