Gene Information

Name : ycdB (L31280)
Accession : NP_266388.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG0217
EC number : -
Position : 231298 - 232014 bp
Length : 717 bp
Strand : +
Note : similar to YeeN from E. coli

DNA sequence :
ATGGGACGTAAATGGGCCAATATTGTTGCTAAAAAAACCGCTAAAGACGGTGCAACTTCTAAAGTATATGCAAAATTCGG
TGTTGAAATCTATGCCGCTGCTAAACAAGGTGAACCAGATCCAGAATCAAATTCATCATTAAAATTCGTTATTGAACGTG
CCAAACAAGCGCAAGTTCCAAAACACGTTATTGATAAAGCAATCGATAAAGCCAAAGGTGGTGGTGATGAAACTTTCGTT
CAAGGACGTTATGAAGGATTTGGACCAAATGGTTCAATGGTTATCGCCGAAACTTTGACTTCAAATGTTAACCGTACAAT
CGCTAATGTCCGTACTACTTTCCACAAAAATGGTGGGAATATCGGAGCAGCCGGTGCTGTCAGCTATATGTTTGACAATA
CAGGGGTGATTGTTTTTGAAGGAACTGACCCTGACCATATCTTTGAAATTTTGCTTGATGCTGAAGTTGATGTTCGTGAT
GTGACCGAAGAAGAAGGAAATATTGTTGTTTATACAGAACCAACAGACCTTCATAAAGGAATTGCAGCACTTAAAGAAGC
TGGAATTACTGAGTTCTCAACAACAGAATTAGAAATGATTCCTCAATCAGAAGTTGAACTTTCACCTGAAGATTTAGAAA
TCTTTGAAGGACTCATTGATGCTCTTGAAGATGACGATGACGTCCAAAAAGTTTATCATAACGTTGCAAATCTCTAA

Protein sequence :
MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFV
QGRYEGFGPNGSMVIAETLTSNVNRTIANVRTTFHKNGGNIGAAGAVSYMFDNTGVIVFEGTDPDHIFEILLDAEVDVRD
VTEEEGNIVVYTEPTDLHKGIAALKEAGITEFSTTELEMIPQSEVELSPEDLEIFEGLIDALEDDDDVQKVYHNVANL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1069 YP_853086.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-104 95