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Name : rnhA (mlr7504) Accession : NP_107806.1 Strain : Mesorhizobium loti MAFF303099 Genome accession: NC_002678 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 6194516 - 6195049 bp Length : 534 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAGCAAACAGGTTGAAATCTTCACCGACGGCGCCTGTTCGGGCAATCCCGGCCCTGGCGGCTGGGGTGCCATCCTGCG CTTCAACGGGACCACCAAGGAGCTTTCCGGTGGCGAGGCCGAAACGACCAACAACCGCATGGAGTTGCTGGCCGCCATCT CGGCGCTGAATGCGCTGAAGGAGCCTTGCACTGTCGAGCTTCACACCGACAGCAAATACGTCATGGACGGCATTTCCAAG TGGATCCATGGCTGGAAGAAGAACGGCTGGAAGACCGCCGACAAGAAGCCGGTCAAGAACGGCGAACTGTGGCAGGCGCT GGACGAAGCCAACCGGCGTCACAAAGTCACTTGGAACTGGGTCAAGGGGCATGCCGGCCACACCGAGAACGAACGCGCCG ACGAGTTGGCCAGGGAAGGCATGGCGCCGTTCAAGAAGGGCTCGTTCAAGCCGGCGGCATCGGCGCCGAAGCCGGATGCC CAGCTGAAGCAGCCGGTAGCCACGAAAGCGCGTCGTTCGACTCAGAGCTATTGA Protein sequence : MSKQVEIFTDGACSGNPGPGGWGAILRFNGTTKELSGGEAETTNNRMELLAAISALNALKEPCTVELHTDSKYVMDGISK WIHGWKKNGWKTADKKPVKNGELWQALDEANRRHKVTWNWVKGHAGHTENERADELAREGMAPFKKGSFKPAASAPKPDA QLKQPVATKARRSTQSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-41 | 62 |
