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Name : glcF (BB1940) Accession : NP_888485.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2076357 - 2077586 bp Length : 1230 bp Strand : + Note : ortholog of Bordetella pertussis (BX470248) BP2903 DNA sequence : ATGCAAACAAATCTTGCTTCTTGGGCACGCGATACCGATTTCGGCGAGGAGGCCGATGCCATCCTGCGCCGTTGCGTGCA TTGCGGTTTCTGTACCGCCACGTGTCCGACCTACCAGGTGCTGGGCGACGAGCTGGACAGTCCGCGCGGCCGCATCTACC TGATCAAGCAGCTGCTCGAAGGCAGCGAGCCGACCCAGGCCACCCAGCAGCACCTGGACCGCTGCCTGACCTGCCGCAAT TGCGAAACGACCTGTCCATCGGGGGTGGAGTATGGGCGGCTGGTCGATATCGGCCGCCAACTGGTCCACGAGCGCGTACC GCGCCGGCTGGGCGACAGGCTGCGCCGCGAAGCGCTGCGCAGAGGCATGAATTCGGCCTGGTTCGGCCCGGCCATGCGGC TGGGCCAGATGGTGCGCGCCATGCTGCCGCAGGCGTTGCGGCGCAAGGTGCCGGCGGCGCGGCCGCCCGGCCTGTTGCCC GATCCGTCGCGCCATGAGCGCCAGGTGCTGATGCTGACCGGCTGCGTGCAGCCGTCCATGATGCCCACCATCGACGCCGC CACCCTGCGCGTGCTCGACGCCATTGGCATCGGCGCGCGCCTGGCGCCGGGCGCGGGCTGTTGCGGCGCCGTCAACTTCC ACCTGGACGCGCAAGGCGAGGCCTTGGCGCAGATGCGTGCCAACGTCGACGCCTGGTGGCCCTGGGTCGAGCGCGGCGAG ATCGAGGCCATCGTCATGAACGCCTCGGGTTGCGGCGCCATGGTGAAGGAGTATGCGCACCATTTGCGCCGAGACCCGGA CTACGCCGAGCGCGCCGCCAGGATCGTGGCGCTGGTCAAGGATGTCGCCGAAGTGGTGGCGCCGCACGCGGCGGCGCTGC GCGAGCGGCTGGCGCCGGGTCCGCGCGCGGCCTTCCATCCGCCCTGCACGCTGCAGCATTGGCAAGGCCTGCGGCCGCTG GCCGAGCGTCTGCTGGTCGAGCTGGGGTTCGAGCTGGCGCCGTTCGGCGAGTCGCATCTGTGTTGCGGCTCGGCCGGCGC CTATTCCGTCCTGAATCCGGACATCGCGCTCACCCTGCGCGACCGCAAGCTGGGCGAGATCGCCGCCGCGGCGCCGACCG TCATCATGTCGTCCAACATCGGTTGCATCGGCCACCTGCAAAGCGGCACGGATACGCCCGTCAGGCATTGGATCGAAGTG GTCGACCAGCGCCTGGCCACTCAGGGCTGA Protein sequence : MQTNLASWARDTDFGEEADAILRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQLLEGSEPTQATQQHLDRCLTCRN CETTCPSGVEYGRLVDIGRQLVHERVPRRLGDRLRREALRRGMNSAWFGPAMRLGQMVRAMLPQALRRKVPAARPPGLLP DPSRHERQVLMLTGCVQPSMMPTIDAATLRVLDAIGIGARLAPGAGCCGAVNFHLDAQGEALAQMRANVDAWWPWVERGE IEAIVMNASGCGAMVKEYAHHLRRDPDYAERAARIVALVKDVAEVVAPHAAALRERLAPGPRAAFHPPCTLQHWQGLRPL AERLLVELGFELAPFGESHLCCGSAGAYSVLNPDIALTLRDRKLGEIAAAAPTVIMSSNIGCIGHLQSGTDTPVRHWIEV VDQRLATQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-96 | 53 |
