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Name : ccmF (BB2808) Accession : NP_889344.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2970872 - 2972866 bp Length : 1995 bp Strand : + Note : - DNA sequence : ATGATCCCGGAAATCGGCCTGTTCAGCCTCATCCTGGCGTTGCTGGTTGCCATCGTGCAGGGCGTGCTGCCGCTGGTGGG CGCATCGACCGGCTGGCAGGCCGGCCTGCGGGTGGCGCGGCCGGCCGCCGTCACCCAATTCTGCCTGGTCACCGTAGCCA TGGGCTGCCTGGCGTGGTCGTTCCTGGACAACGATTTCTCGGTGCTGTACGTGGCGGGCAACTCGCACGCCGACCTGCCC GCCGCCTACCGCTTCGCGGCGCTATGGGGCGGCCACGAGGGATCGCTGCTGCTGTGGCTGTACCTGCTGACCGCCTGGAC GCTGGCGGTGGCGCTGCACAGCCGCGCGCTGCCGCCGGCCTTCGCGGCGCGCGTGCTGGCCGTCATGGCCTGGATCAGCA TCGGCTTCCTGCTGTTCCTGCTGTTCCTGTCCAATCCGTTCGAGCGCCTGATGCCGCCGGCGCAGGCCGGACGCGACTTG AACCCCTTGCTGCAGGATCCGGGCATGATCGTGCATCCGCCCATGCTGTACATGGGCTATGTGGGCTTTTCGGTGGCGTT CGCCTTCGCCATCGCCGCGCTGCTGTCGGGCGAGCTGGACGCCATCTGGGCGCGCTGGGTGCGGCCCTGGACCTTGCTGG CCTGGATGTTCCTGACCATCGGCATCCTGCTGGGCAGCGCCTGGGCCTACTACGTCCTGGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAGAACGCCTCGTTCATGCCGTGGCTGGCCGGCACGGCGCTGATCCATTCCCTGATCGTCACGGAGCG GCGCGGCGCCTTCCGCAGCTGGACGGTGCTGCTGGCCATCGCGGCGTTCTCGCTGAGCATACTGGGTACTTTCCTGGTGC GCTCCGGCGTGCTGACCTCGGTGCACGCCTTCGCGGTCGATCCCGGCCGCGGGCTGTACATCCTGGGCTTCATGACGCTG ATCGTGGGCGGCTCGCTGGCCCTGTACGCCTGGCGCGCGCCCACCGTGGGCCTGGGCGGGGGCTTCGCCCTGCTGTCGCG CGAATCGCTGCTGCTCAGCAACAACGTGGTGCTGGCCGCGGCCACCGGCGCGGTGCTGCTGGGCACGCTGTACCCGGTGG CGCTGGACGTGCTGGACTGGGGCAAGATCTCGATCGGCCCGCCCTACTTCGAGGCGGTGTTCGTGCCGCTGATGACGCCG GCGATCTTCCTGATGGGCGTGGGACCGATGGCGCGCTGGAAGCACAGCGCCGTGCCGGACCTGGCGCAGCGCCTGCGCAT TGCCTTCGGCGTGAGCCTGGCCACCGCGCTGGCGGTGCCGCTGGCCTGGCCCGGCGCGCGCGCCTGGCCAGGCTCGCCGC TGATCGTATTGGGCCTGTGGCTGGCGGCCTGGTCGGTCGCCAGCGCCGCCGCGCATGCCTGGCAGCGCCTGGCCGACGGC GAAGGCTCGTGGGCGCGGCGCCTGCGCCGCCAGCCGCGCGCCTGGTACGGCATGCTGCTGGCGCACGCCGGCGTGGGCGT GTTCATCGCCGGCGTGACGCTGGCCAATGGCTATGAGGACAAGCAGGAATTGCGCATGGACATCGGCGCCACGCAGGCCG CCGGCGGCTACCAGTTCACCTTCGCCGGTATCGCGCCGGCCGCCGGCCCCAACTACCAGGCCGAACGCGCCCGCTTCGTG GTCACGCGCGACGGCCGGCCGGTGGTCACGCTGCATCCCGAGAAACGCCACTACACGGTGCAGGGCATGCCGCTCAGCCA TGCCGCCATCGACACCCGCTTTACCCGTGACCTGTTCGTGGCGCTGGGCGAGCCGGTCGGCGAGCGGGCCTGGACGGTGC GGCTGCAGGTCAAGCCCTTCATGGCCTGGATCTGGTCGGGTTGCGTGCTGATGGCGCTGGGCGGCCTGATGGCGGCAACC GACCGGCGCTACCGCCAGTGGCGCGCCGCCGAAGCGCGCCAAGCGGTGGCGGCGGTGGCGCGGGAGGCCGGCTGA Protein sequence : MIPEIGLFSLILALLVAIVQGVLPLVGASTGWQAGLRVARPAAVTQFCLVTVAMGCLAWSFLDNDFSVLYVAGNSHADLP AAYRFAALWGGHEGSLLLWLYLLTAWTLAVALHSRALPPAFAARVLAVMAWISIGFLLFLLFLSNPFERLMPPAQAGRDL NPLLQDPGMIVHPPMLYMGYVGFSVAFAFAIAALLSGELDAIWARWVRPWTLLAWMFLTIGILLGSAWAYYVLGWGGWWF WDPVENASFMPWLAGTALIHSLIVTERRGAFRSWTVLLAIAAFSLSILGTFLVRSGVLTSVHAFAVDPGRGLYILGFMTL IVGGSLALYAWRAPTVGLGGGFALLSRESLLLSNNVVLAAATGAVLLGTLYPVALDVLDWGKISIGPPYFEAVFVPLMTP AIFLMGVGPMARWKHSAVPDLAQRLRIAFGVSLATALAVPLAWPGARAWPGSPLIVLGLWLAAWSVASAAAHAWQRLADG EGSWARRLRRQPRAWYGMLLAHAGVGVFIAGVTLANGYEDKQELRMDIGATQAAGGYQFTFAGIAPAAGPNYQAERARFV VTRDGRPVVTLHPEKRHYTVQGMPLSHAAIDTRFTRDLFVALGEPVGERAWTVRLQVKPFMAWIWSGCVLMALGGLMAAT DRRYRQWRAAEARQAVAAVAREAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-132 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-95 | 52 |
