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Name : fecI (BB3660) Accession : NP_890195.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Virulence Product : ECF family RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3873384 - 3873917 bp Length : 534 bp Strand : - Note : ortholog of Bordetella pertussis (BX470248) BP1136 DNA sequence : GTGCCTGCCAGCCTGATCACTTCGCCCTCCGCCCGTCCCGCCGCCGACACCGCCGCGGTGGAGGGCCTGTACCGCCAGCA CCGGTCGTGGCTGGCCGGATGGCTGCGGCGGCGGCTGGGCTGTCCGCACCGCGCCGAGGACCTGACGCAGGATGTGTTCG TGCGCGTGATCCAGGGGCGCAAGGCGGTACGCATGGAGCAGGCGCGCGCCTTGCTGGCCACCATCGCCAAGGGACTGGTC ATCGATCACCAGCGCCGTGCGGCGCTGGAGCACGCTTATCTGGAATACCTGGCGGCGCAGCCGTCGGGGCACGCGCCTTC GCCGCAACAGCAGGCCGAGCTGCTGCAGGCGCTGGTCGAGCTCGATCGCCTGCTCGAAGGCTTGCCGCCGCGCGCCCGCG CGGTGTTCCTGATGTCGCAGCTCGAAGGGCTGGGCTATGCCGAGATCGCGCAACGCCTGCGCATTTCGCTCAGTTCGGTG CAGCAATACATGCTGCGCGCCATGAGCGCTTGTTACATGGCATTCCATGAGTAG Protein sequence : MPASLITSPSARPAADTAAVEGLYRQHRSWLAGWLRRRLGCPHRAEDLTQDVFVRVIQGRKAVRMEQARALLATIAKGLV IDHQRRAALEHAYLEYLAAQPSGHAPSPQQQAELLQALVELDRLLEGLPPRARAVFLMSQLEGLGYAEIAQRLRISLSSV QQYMLRAMSACYMAFHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 4e-24 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fecI | NP_890195.1 | ECF family RNA polymerase sigma factor | VFG1049 | Protein | 2e-24 | 43 |
