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Name : dnaQ (BB4275) Accession : NP_890810.1 Strain : Bordetella bronchiseptica RB50 Genome accession: NC_002927 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 4551958 - 4552692 bp Length : 735 bp Strand : - Note : 3'-5' exonuclease of DNA polymerase III DNA sequence : ATGCGCCAGATCATTTTCGATACGGAAACCACCGGCCTGGACCCGGCCCAGGGCCATCGCATCGTCGAAATCGGTTGCGT CGAGATCGTCAACCGGATGGTCACGGGCAACAATCTGCACCTCTACCTGAACCCCGACCGCGACAGCGACCCCGAGGCGC TGGCGGTGCACGGCCTGACCACCGAGTTCCTGGCCGACAAGCCGCGCTTTGCCGAAGTGGCCGAGCAATTCCTGGCTTTC ATCGCCGACGCCGAGCTGATCGCCCACAACGCCGCGTTCGACGTCAAGTTCTTCAACGCCGAGCTGCAGCGCATCGGCCG CGATCCGCTGAACACCCACTGCGAGAACATTGTCGATTCGCTGCTGCATGCGCGCAGCCTGCACCCCGGCAAGCGCAACT CGCTCGACGCGCTGTGCGACCGCTACGGCATCTCCAACGCCCACCGGACCCTGCACGGCGCCTTGCTCGACTCGCAGCTG CTGGCCGAGGTCTGGCTGGCGATGACGCGCGGCCAGGACGCCTTGCTGATCGACGTCGATGACCAGGGCGCGAACGCCAA CGGCGCGTTGGTGCTGGGCAAGTTCGATGCCTCGGTGCTGACCGTGCTGGCCGCCAGCGAAGCGGAATTGGCCGAGCATG CGGCCTATCTGCAGGCGCTGGACAAGGCGGTCGGCGGGGCCTGCGCCTGGCGCGCGATCGAGCCGCTGCCCGCGGAATCC GGGCAGCCTGGCTGA Protein sequence : MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAF IADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQL LAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAES GQPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 7e-46 | 49 |
