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Name : iscS (BPP2028) Accession : NP_884286.1 Strain : Bordetella parapertussis 12822 Genome accession: NC_002928 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 4.4.1.- Position : 2169019 - 2170230 bp Length : 1212 bp Strand : + Note : catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis DNA sequence : ATGAGCAATCGCCCCATCTACCTGGACTACTCGGCTACCACGCCGGTCGACCCGCGCGTGGTCGAGAAAATGATTCCCTG GTTGTACGAGAGTTTCGGCAATCCGGCCTCGCGCAGCCACGCCTTTGGCTGGGAAGCCGAGGACGCGGTCGAGAAGGCTC GCGAGGAAGTCGCCAAGCTGGTCAACGCCGATCCGCGCGAGATCGTCTGGACTTCCGGCGCCACCGAGTCGGACAACCTG GCCATCAAGGGCGCGGCGAATTTCTATGCCGAGCGCGGCAAGCACATCATTACCGTCAAGACCGAACACAAGGCGGTGCT GGATACCTGTCGGGAGCTCGAACGCCAGGGCTTTGAAGTGACCTACCTGGATGTCCAGGACGATGGTCTGCTCAGCCTCG ATGCGTTCAAGGCCGCGCTGCGTCCGGATACCATCCTGGTGTCGGTGATGATGGTCAACAACGAGATCGGCGTCATCCAG GACATCGCCGCGCTGGGCGAGATCTGCCGCGAGAAGGGCATCATCTTCCACGTGGACGCGGCCCAGGCCACCGGCAAGGT CGAGATCGACCTGCAGAAGCTGAAGGTGGACCTGATGTCGTTCTCGGCGCACAAGACGTACGGCCCCAAGGGCATCGGCG CGCTGTATGTGCGGCGCAAGCCGCGCGTGCGCATCGAGGCGCAGATGCACGGCGGCGGCCACGAGCGGGGCTTCCGCTCG GGCACGCTGGCCACGCACCAGATCGTCGGCATGGGCGAGGCGTTCCGCCTGGCGCGCGAGGAAATGGGCACCGAGAACGA GCGCGTGCGCATGCTGCGCGACCGCCTGCTGGCCGGCCTGACGCAGATCGAGGAAGTGTATGTGAACGGCAGCATGGAGC ACCGCGTGCCGCACAACCTGAACATCAGCTTCAACTATGTCGAGGGCGAGTCCCTGATCATGGCGATCAAGGAGCTGGCC GTCTCCAGCGGTTCGGCCTGCACGTCGGCCAGCCTGGAGCCGTCCTATGTGCTGCGCGCGCTGGGCCGCAACGACGAGCT GGCGCACAGCTCCATCCGCTTCACCCTGGGCCGCTTCACGACCGAACAGGAAATCGACTTCACGATCGAACTGATCAAGA GTCGTGTCGGCAAGCTGCGCGATATGTCGCCGTTGTGGGAAATGGCCCAGGAAGGCATTGATCTGAATTCCGTGCAGTGG GCCGCGCACTGA Protein sequence : MSNRPIYLDYSATTPVDPRVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNL AIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQ DIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRS GTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELA VSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQW AAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 8e-143 | 74 |
