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Name : gap (BP1000) Accession : NP_879794.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : glyceraldehyde-3-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 1045656 - 1046666 bp Length : 1011 bp Strand : + Note : Similar to Pseudomonas aeruginosa glyceraldehyde 3-phosphate dehydrogenase Gap or HexC or pa3195 SWALL:G3P_PSEAE (SWALL:P27726) (334 aa) fasta scores: E(): 9.1e-84, 66.07% id in 336 aa, and to Alcaligenes eutrophus glyceraldehyde 3-phosphate dehydrogenase DNA sequence : ATGACCATTCGCGTCGTCATCAACGGCTACGGCCGCATCGGCCGCAACATCCTGCGCGCCCACTACGAAAACGGCAAGAA GCACGATATCGAGATCGTCGCCATCAACGACCTGGGCGATCCCAAGACCAACGCGCACCTGACGCGTTTCGACACGGCGC ACGGCAAGTTCCCCGGCACCGTGACGGTCGACGGCGACTACATGGTCGTCAACGGCGACAAGATCCGCGTGCTGGCCAAC CGCAACCCGGCCGAACTGCCGTGGGGCGAGCTGGGCGTGGACGTGGTGCTGGAGTGCACGGGCTTTTTCACCTCCAAGGA AAAGGCCGGCGCGCACCTGAAGGGCGGCGCCAAGAAGGTCATCATCTCGGCGCCCGGCGGCAAGGACGTCGACGCCACCA TCGTGTTCGGCGTGAACCAGAACGTGCTCAAGGCCGAGCACACCGTGATCTCCAACGCCTCGTGCACCACCAACTGCCTG GCCCCGCTGGTCAAGCCGCTGCACGACAAGCTGGGCGTGGAAACCGGCCTGATGACCACCGTGCACGCCTACACCAATGA CCAGGTGCTGACCGACGTCTACCACGAAGACCTGCGCCGCGCCCGCTCGGCCACCATGAGCATGATCCCGACCAAGACCG GCGCGGCCGCCGCGGTCGGCCTGGTGCTGCCCGAGCTCAACGGCAAGCTGGACGGTTTCGCGATCCGCGTGCCGACCATC AACGTCTCGCTGGTCGACCTGTCCTTCGTGGCCAAGCGCGACACCACCGTCGAGGAAGTCAACAGCATCCTGCAGGCCGC CGCCGAAGGCGAGCTCAAGGACATCCTGACCTACAACACCGAGCCGCTGGTGTCGATCGACTTCAACCACAACCCGGCCT CCAGCAACTTCGACGCGACCCTGACCAAGGTGTCCGGCAAGCTGGTCAAGGTCTCGTCGTGGTACGACAACGAGTGGGGC TTCTCGAACCGCATGCTCGACACCACCGTCGCGCTGATGTCGGCCAAGTAA Protein sequence : MTIRVVINGYGRIGRNILRAHYENGKKHDIEIVAINDLGDPKTNAHLTRFDTAHGKFPGTVTVDGDYMVVNGDKIRVLAN RNPAELPWGELGVDVVLECTGFFTSKEKAGAHLKGGAKKVIISAPGGKDVDATIVFGVNQNVLKAEHTVISNASCTTNCL APLVKPLHDKLGVETGLMTTVHAYTNDQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGLVLPELNGKLDGFAIRVPTI NVSLVDLSFVAKRDTTVEEVNSILQAAAEGELKDILTYNTEPLVSIDFNHNPASSNFDATLTKVSGKLVKVSSWYDNEWG FSNRMLDTTVALMSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 1e-78 | 49 |
