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Name : cspA (BP1772) Accession : NP_880483.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : cold shock-like protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 1862239 - 1862439 bp Length : 201 bp Strand : + Note : Similar to Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 1.2e-15, 71.66% id in 60 aa, and to Escherichia coli cold shock protein CspA or B3556 or Z4981 or Ecs4441 or Sty4153 SW:CSPA_ECOLI (P15277) (69 DNA sequence : ATGGCAACCGGTATCGTCAAGTGGTTCAATGCCGAAAAGGGCTATGGATTCATCATGCCCGATGACGGCAGTAAAGATCT TTTTGCACATTATTCCGAGATCTGCAGCGAGGGCTACAAATCGCTGCAGGAGAATCAGCGCGTATCCTTCGAGGTGGGAC AAGGGCCCAAGGGCCCAAGGGGCCAAGCGCCAAGAACATAA Protein sequence : MATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEICSEGYKSLQENQRVSFEVGQGPKGPRGQAPRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 2e-14 | 60 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 0.030 | 41 |
