|
Name : iscS (BP1799) Accession : NP_880505.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 1889727 - 1890938 bp Length : 1212 bp Strand : + Note : catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis DNA sequence : ATGAGCAATCGCCCCATCTACCTGGACTACTCGGCTACCACGCCGGTCGACCCGAGCGTGGTCGAGAAAATGATTCCCTG GTTGTACGAGAGTTTCGGCAATCCGGCCTCGCGCAGCCACGCCTTTGGCTGGGAAGCCGAGGACGCGGTCGAGAAGGCCC GCGAGGAAGTTGCCAAGCTGGTCAACGCCGATCCGCGCGAGATCGTCTGGACTTCCGGCGCTACCGAGTCGGACAACCTG GCCATCAAGGGCGCGGCGAATTTCTACGCCGAGCGCGGCAAGCACATCATTACCGTCAAGACCGAACACAAGGCGGTGCT GGATACCTGTCGGGAGCTCGAACGCCAGGGCTTTGAAGTGACCTACCTGGATGTCCAGGACGATGGTCTGCTCAGCCTCG ATGCGTTCAAGGCTGCGCTGCGCCCGGATACCATCCTGGTGTCGGTGATGATGGTCAACAACGAGATCGGCGTCATCCAG GACATCGCCGCGCTGGGCGAGATCTGCCGCGAGAAGGGCATCATCTTCCACGTGGACGCGGCCCAGGCCACCGGCAAGGT CGAGATCGACCTGCAGAAGCTGAAGGTGGACCTGATGTCGTTCTCGGCGCACAAGACGTACGGCCCCAAGGGCATCGGCG CGCTGTATGTGCGGCGCAAGCCGCGCGTGCGCATCGAGGCGCAGATGCACGGCGGCGGCCACGAACGGGGCTTCCGGTCG GGCACGCTGGCCACGCACCAGATCGTCGGCATGGGCGAGGCGTTCCGCCTGGCGCGCGAGGAAATGGGCACCGAGAACGA GCGCGTGCGCATGCTGCGCGACCGCCTGCTGGCCGGCCTGACGCAGATCGAGGAAGTGTATGTGAACGGCAGCATGGAGC ACCGCGTGCCGCACAACCTGAACATCAGCTTCAACTATGTCGAGGGCGAGTCTCTGATCATGGCGATCAAGGAGCTGGCC GTTTCCAGCGGTTCGGCCTGCACGTCGGCCAGCCTGGAGCCGTCCTATGTGCTGCGCGCGCTGGGCCGCAACGACGAGCT GGCGCACAGCTCCATCCGCTTTACCCTGGGCCGCTTCACGACCGAACAGGAAATCGACTTCACGATCGAACTGATCAAGA GTCGTGTCGGCAAGCTGCGCGATATGTCGCCGTTGTGGGAAATGGCCCAGGAAGGCATTGATCTGAATTCCGTGCAGTGG GCCGCGCACTGA Protein sequence : MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNL AIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQ DIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRS GTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELA VSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQW AAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 3e-142 | 74 |
