|
Name : BP2757 (BP2757) Accession : NP_881361.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : cold-shock protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 2934725 - 2934970 bp Length : 246 bp Strand : + Note : Similar to Salmonella typhimurium cold shock protein CspA SW:CSPA_SALTY (P37410) (69 aa) fasta scores: E(): 8.7e-15, 66.66% id in 66 aa. Also similar to many cold shock-like proteins e.g. Stigmatella aurantiaca cold shock-like protein CspA SW:CSPA_STIAU ( DNA sequence : ATGTCTGATACGACCGCAACCGCTGTCCAAGGGGACAATCCTAAAGCCACGGGTACCGTTAAATGGTTCAACGATGCGAA GGGGTTCGGATTCATCACGCCCGATGACGGCGGTGAAGATCTGTTCGCGCATTTCTCGTCCATCCAGATGAACGGTTTCA AAACCCTAAAAGAAGGCCAGAAGGTCTCGTTCGAGATCATTCAGGGTCCCAAGGGCAAACAGGCACTCAATATTACGTCT GCCTGA Protein sequence : MSDTTATAVQGDNPKATGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVSFEIIQGPKGKQALNITS A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 1e-15 | 62 |
