Gene Information

Name : BP2820 (BP2820)
Accession : NP_881418.1
Strain : Bordetella pertussis Tohama I
Genome accession: NC_002929
Putative virulence/resistance : Virulence
Product : alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 2997900 - 2999054 bp
Length : 1155 bp
Strand : +
Note : Similar to several including: Pseudomonas putida alcohol dehydrogenase AdhA TR:O68647 (EMBL:AF052750) (382 aa) fasta scores: E(): 2e-38, 39.06% id in 384 aa and to Escherichia coli ethanolamine utilization protein EutG or b2453 SW:EUTG_ECOLI (P76553) (395

DNA sequence :
GTGGCGATGTTTGAGTTCTGTACGCATGCGAGGACGCTGGTTGGCGCTGGCGCCAGCGACGCCCTGGGAGAGACGCTGGC
GGCCCGGTGGGGCGCGAGCCGCGTCCTGCTGGTGACGGACGGCGCGCTGGTTTCACTGGGCCTGGCGGGCCGGCTGCGCG
ACGCGCTGACCAGCGCGGGCCATACGGTGGCCATGTTCGATGAGGTGGTCGCGGATCCGCCGGAGTCGGTGGTCGAGCGC
GCCATCACGGCGGCGCGCGATGCCCGGGCCCAGATGATCGTGGGCTTTGGCGGAGGTTCTTCGATGGATGTGGCCAAGCT
GGCTGCCGCATTCGCCGGGACGACGCAGGACTTGCGCCAAGCCTATGGCATAGGCCTGGTCGCGGGGCCGCGCTTGCCGC
TGGTGCAGGTGCCGACCACGGCGGGCACCGGCTCGGAGGCCACGCCGATCGCCGTCGTGACGACCGGCGAGGGCGCCAAG
GCCGGCGTCATCTCGCCCGTGCTGTACGCCGACCTGGCCGTCCTGGACGCCTCCTTGACGCTGGGCCTGCCGCCGGCCAT
CACCGCGGCCACCGGTATCGATGCCATGGTGCACGCGACCGAAGCATATACCAGCCGGGTGCTCAAGAATCCCATTTCCG
ACGCCCTGGCGCGCGAAGCGTTGCGGTTGCTGTTTCGCGCGTTGCCGGTCGCTTGCCGCGACGGCGGCGACCTGGCGGCG
CGGCAGGACATGCTGCTGGGCGCGATGCTGGCGGGCCAGGCGTTCGCCAATGCGCCGGTGGGCGCCGTGCATGCGCTGGC
CTATCCGTTGGGCAGCGCATTCCATGTGCCGCACGGGCTGTCCAATTCCCTGGTGCTGGGGCCGGTGCTGCGGTTCAATT
CGCTGCGTTGCGAGACCCAGTACGCGGAGCTGGCGGACGTGATCCTGCCGGGGCATGCCGGCGGCGTGGCGGAAAAGGCC
GCCGCGTTCGTGCAGGCGATGGCCGAGGTGGCAGGGGCGCTGGAACTGCCGACGCGGCTGGCGCAGGTCGGCGTCACGGC
GGCGGACATCCCGGCGCTGGCCGGGCTGGCCCTGCAGCAACAGCGCCTGCTGGCGAACAATCCGCGCGATGTCACGCTGG
CCGACGCCACGCGACTCTACGAAGAGGCGTTCTGA

Protein sequence :
MAMFEFCTHARTLVGAGASDALGETLAARWGASRVLLVTDGALVSLGLAGRLRDALTSAGHTVAMFDEVVADPPESVVER
AITAARDARAQMIVGFGGGSSMDVAKLAAAFAGTTQDLRQAYGIGLVAGPRLPLVQVPTTAGTGSEATPIAVVTTGEGAK
AGVISPVLYADLAVLDASLTLGLPPAITAATGIDAMVHATEAYTSRVLKNPISDALAREALRLLFRALPVACRDGGDLAA
RQDMLLGAMLAGQAFANAPVGAVHALAYPLGSAFHVPHGLSNSLVLGPVLRFNSLRCETQYAELADVILPGHAGGVAEKA
AAFVQAMAEVAGALELPTRLAQVGVTAADIPALAGLALQQQRLLANNPRDVTLADATRLYEEAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 8e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BP2820 NP_881418.1 alcohol dehydrogenase VFG1593 Protein 5e-30 41