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Name : glcF (BP2903) Accession : NP_881485.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 3080246 - 3081475 bp Length : 1230 bp Strand : - Note : Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SW:GLCF_ECOLI (P52074) (407 aa) fasta scores: E(): 3.4e-77, 52.69% id in 408 aa and to Rhizobium loti glycolate oxidase subunit Mlr6920 TR:Q987T7 (EMBL:AP003010) (441 a DNA sequence : ATGCAAACAAATCTTGCTTCTTGGGCACGCGATACCGATTTCGGCGAGGAGGCCGATGCCATCCTGCGCCGTTGCGTGCA TTGCGGTTTCTGTACCGCTACGTGTCCGACCTACCAGGTACTGGGCGACGAGCTGGACAGTCCGCGCGGCCGCATCTACC TGATCAAGCAGCTGCTCGAAGGCAGCGAGCCGACCCAGGCCACCCAGCAGCACCTGGACCGCTGCCTGACCTGCCGCAAT TGCGAAACGACCTGTCCATCGGGGGTGGAGTATGGGCGGCTGGTCGATATCGGCCGCCAACTGGTCCACGAGCGCGTACC GCGCCGGCTGGGCGACAGGCTGCGCCGCGAAGCGCTGCGCAGAGGCATGAATTCGGCCTGGTTCGGCCCGGCCATGCGGC TGGGCCAGATGGTGCGCGCCATGCTGCCGCAGGCGTTGCGGCGCAAGGTGCCGGCGGCGCGGCCGCCCGGCCTGTTGCCC GATCCGTCGCGCCATGAGCGCCAGGTGCTGATGCTGACCGGCTGCGTGCAGCCGTCCATGATGCCCACCATCGACGCCGC CACCCTGCGCGTGCTCGACGCCATTGGCATCGGCGCGCGCCTGGCGCCGGGCGCGGGCTGTTGCGGCGCCGTCAACTTCC ACCTGGACGCGCAAGGCGAGGCCTTGGCGCAGATGCGCGCCAACGTCGACGCCTGGTGGCCCTGGGTCGAGCGCGGCGAG ATCGAGGCCATCGTCATGAACGCCTCGGGTTGCGGCGCCATGGTGAAGGAGTATGCGCACCATTTGCGCCGAGACCCGGA CTACGCCGAGCGCGCCGCCAGGATCGTGGCGCTGGTCAAGGATGTCGCCGAAGTGGTGGCGCCGCACGCGGCGGCGCTGC GCGAGCGGCTGGCGCCGGGTCCGCGCGCGGCCTTCCATCCGCCCTGCACGCTGCAGCATTGGCAAGGCCTGCGGCCGCTG GCCGAGCGTCTGCTGGTCGAGCTGGGGTTCGAGCTGGCGCCGTTCGGCGAGTCGCATCTGTGTTGCGGCTCGGCCGGCGC CTATTCCGTCCTGAATCCGGACATCGCGCTCACCCTGCGCGACCGCAAGCTGGGCGAGATCGCCGCCGCGGCGCCGACCG TCATCATGTCGTCCAACATCGGTTGCATCGGCCACCTGCAAAGCGGCACGGATACGCCCGTCAGGCATTGGATCGAAGTG GTCGACCAGCGCCTGGCCACTCAGGGCTGA Protein sequence : MQTNLASWARDTDFGEEADAILRRCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKQLLEGSEPTQATQQHLDRCLTCRN CETTCPSGVEYGRLVDIGRQLVHERVPRRLGDRLRREALRRGMNSAWFGPAMRLGQMVRAMLPQALRRKVPAARPPGLLP DPSRHERQVLMLTGCVQPSMMPTIDAATLRVLDAIGIGARLAPGAGCCGAVNFHLDAQGEALAQMRANVDAWWPWVERGE IEAIVMNASGCGAMVKEYAHHLRRDPDYAERAARIVALVKDVAEVVAPHAAALRERLAPGPRAAFHPPCTLQHWQGLRPL AERLLVELGFELAPFGESHLCCGSAGAYSVLNPDIALTLRDRKLGEIAAAAPTVIMSSNIGCIGHLQSGTDTPVRHWIEV VDQRLATQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-96 | 53 |
