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Name : rnhA (BP3211) Accession : NP_881762.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 3423301 - 3423768 bp Length : 468 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCAGAATCTAGAAGGTAGCGGCGATGGCCAGCAGGTGGAAATGTGGACCGACGGCGCATGCAAGGGCAATCCCGGCCC GGGCGGATGGGGCGTGCTGATGCGCGCCGGCCAGCACGAGAAAACCATGCACGGCGGCGAACGCCAGACCACCAACAACC GCATGGAGCTGATGGCCGTCATCGAGGGCCTGCGGGCGCTGAAACGGCCGTGCCGCGTCACCATCCACACCGATTCCCAA TATGTCATGAAAGGCATGACGGAATGGCTGGCGAACTGGAAGCGGCGCGGCTGGCGCACGGCCGACAAGAAACCGGTCAA GAACGTCGAGCTGTGGCAGGCCCTGGACGAGCAGGTCGGCCGGCACCAGGTGCAGTGGCGCTGGGTGCGCGGGCACGCCG GCGATCCGGGCAACGAGCGCGCCGACGCCCTGGCCAACCAGGGGATGGAGGCCGCGCGGGGCCGCTAG Protein sequence : MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQ YVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 7e-41 | 59 |
