Gene Information

Name : BP3871 (BP3871)
Accession : NP_882366.1
Strain : Bordetella pertussis Tohama I
Genome accession: NC_002929
Putative virulence/resistance : Unknown
Product : cold shock-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4084259 - 4084465 bp
Length : 207 bp
Strand : +
Note : Similar to Escherichia coli cold shock-like protein CspC SW:CSPC_ECOLI (P36996) (68 aa) fasta scores: E(): 1.1e-14, 62.9% id in 62 aa, and to Salmonella typhimurium cold shock protein CspA SW:CSPA_SALTY (P37410) (69 aa) fasta scores: E(): 1.1e-14, 64.06%

DNA sequence : 
ATGGCTCAAAAGGGCAAGGTCAAGTGGTTCAACGCCGACAAGGGTTATGGATTCATCACTCCGGACAGCGGCGGTACTGA
CGTATTCGCACATTTCTCTGCGATTCAAGGCCGCGGTTATCGCAGCCTGAACGAAGGTCAGGAAGTCGAGTTCGAAGTGA
AGGATGTTCCGAAAGGACCTCAAGCGGCCGAAATTCGCCCGCTCTGA

Protein sequence : 
MAQKGKVKWFNADKGYGFITPDSGGTDVFAHFSAIQGRGYRSLNEGQEVEFEVKDVPKGPQAAEIRPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-15 53