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Name : cspA (BP0426) Accession : NP_879289.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Unknown Product : cold shock protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 428176 - 428379 bp Length : 204 bp Strand : - Note : Similar to Escherichia coli cold shock protein CspA or B3556 SW:CSPA_ECOLI (P15277) (69 aa) fasta scores: E(): 9.5e-12, 55.385% id in 65 aa, and to Bordetella pertussis cold shock-like protein CspA SW:CSPA_BORPE (Q9Z5R4) (67 aa) fasta scores: E(): 2.9e-16 DNA sequence : ATGCAAACAGGCATAGTCAAGTGGTTCAACGACGAGAAAGGGTTTGGTTTCATCATGCCGGAAAACGGCGGCCCCGATCT TTTCGCTCACTACTCTGAAATCCAGGGCGAAGGCCACAAAGTCCTCGTCGAACAGCAGCGAGTGAGCTACGTCCCAGGCC ACGGACCCAAGGGGCCGATGGCCACCAAGATCACTCCGTTGTGA Protein sequence : MQTGIVKWFNDEKGFGFIMPENGGPDLFAHYSEIQGEGHKVLVEQQRVSYVPGHGPKGPMATKITPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 3e-13 | 53 |
