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Name : cyaB (BP0761) Accession : NP_879579.1 Strain : Bordetella pertussis Tohama I Genome accession: NC_002929 Putative virulence/resistance : Virulence Product : cyclolysin secretion ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 781426 - 783564 bp Length : 2139 bp Strand : + Note : Identical to the previously sequenced Bordetella pertussis cyclolysin secretion ATP-binding protein CyaB SW:CYAB_BORPE (P18770) (712 aa) fasta scores: E(): 0, 97.199% id in 714 aa, and to Escherichia coli hemolysin secretion ATP-binding protein, chromosom DNA sequence : ATGACGTCGCCCGTGGCGCAATGCGCCAGCGTGCCCGATTCCGGGTTGCTCTGCCTGGTCATGCTGGCTCGCTATCACGG ATTGGCAGCCGATCCCGAGCAGTTGCGGCATGAGTTCGCCGAGCAGGCATTCTGTAGCGAAACGATACAGCTGGCGGCGC GCCGGGTCGGCCTGAAAGTGCGGCGGCACCGACCCGCGCCGGCGCGGCTGCCACGCGCGCCGCTGCCGGCCATCGCGCTG GACCGGCAGGGCGGCTACTTTGTTCTTGCCCGCTTCGAGCCCGGCGCGGACCAGGCCGTACTCATCCAGCGTCCGGGCCA GGCGCCCGCGCGCCTGGGGCAGGCCGAGTTCGAGGCGCTGTGGGCGGGGGAGCTGCTGCTTTGTGCTTGCGCGGCCAGCC CGACGCAGGCCCTGGCGCGCTTTGACTTCAGCTGGTTCATTCCGGCGCTGGTCAAGCATCGCCATCTCATCGGTGAGGTG CTGCTGATCTCGTTGGTGCTGCAGTTCATTGCCCTGTTGACGCCCTTGTTCTTCCAGGTGGTCATGGACAAAGTGCTGGT CAACAACGCCATGGAAACGCTCAATGTCATCGCAGTGGGGTTCCTGGCGGCCATCCTGTTCGAGGCCCTGTTGACCGGCA TCCGTACTTACCTGTTTGCGCATACCAGCAGCAAGCTGGATGTGGAGCTGGGTGCGCGCCTTTACGCGCATCTGCTGCGC TTGCCGCTGGCGTACTTCCAGGCGCGCCGGGTGGGCGACTCGGTGGCCCGCGTGCGCGAACTGGAGCATATCCGCGCCTT TCTTACCGGCAATGCCGTGACGGTGCTGCTCGATGTGGTGTTTTCCGTGGTGTTCATCGCCGTCATGTTCTTCTACAGCG TGAAGCTGACGCTGGTCGTGCTGGCGGCGTTGCCTTGCTATTTTCTTCTGTCGCTGGTGCTGACGCCGGTGCTGCGCCGC CGCCTGGATGTCAAGTTCAACCGTGGCGCCGAGAACCAGGCCTTTCTGGTGGAGACCGTCAGCGGCATCGACACCGTCAA GTCGCTGGCGGTCGAGCCGCAGTGGCAGCGCAACTGGGACCGGCAGCTGGCCGGTTACGTCGCGGCCGGCCTGTCGGTGG CCAACGTCGCCATGCTGGCCAACACCGGGGTGACGCTGATCAGCCGGCTGGTTGCGCTGGGAGTCCTGTGGGTGGGCGCC ACCGAGGTGGTCGCGCAGCGCATGACCGTGGGTGAGCTGGTGGCCTTCAACATGCTGTCCGGCCATGTGACGCAACCCGT GATCCGGTTGGCGCAGCTGTGGAACGATTTCCAGCAGACCGGCGTTTCGATGCAGCGTCTGGGCGACATCCTGAACTGCC GTACCGAGGTGGCCGGCGACAAGGCACAATTGCCGGCGCTGCGCGGTTCCATCGAGCTGGACCGGGTATCGTTTCGCTAT CGGCCGGACGCCGCCGATGCGCTGCGCAATGTCAGCCTGCGCATTGCGCCGGGCGAGGTGGTGGGTGTGGTAGGGCGTTC CGGGTCGGGCAAGAGTACGCTGACTCGGCTGATACAGCGCATGTTCGTCGCCGACCGCGGCCGGGTGCTGATCGACGGCC ATGACATCGGCATCGTGGACAGCGCTTCGCTGCGGCGCCAGCTGGGCGTTGTGCTGCAGGAAAGCACGCTGTTCAACCGC AGCGTACGCGACAACATTGCGCTGACCCGCCCCGGCGCGAGCATGCACGAAGTGGTGGCGGCGGCGCGGCTGGCGGGAGC GCACGAGTTCATCTGCCAGTTGCCTGAAGGCTACGACACCATGCTGGGCGAGAACGGCGTGGGATTGTCGGGCGGTCAGC GCCAGCGCATCGGCATCGCCCGCGCGCTGATCCATCGCCCGCGCGTGCTGATCCTGGACGAGGCCACCAGCGCGCTGGAC TACGAGTCGGAGCACATCATCCAGCGCAACATGCGCGATATCTGCGACGGCCGCACTGTGATCATCATCGCCCACCGGCT CTCCGCCGTGCGCTGCGCCGATCGCATCGTCGTGATGGAGGGCGGCGAGGTGGCCGAGTGCGGCAGCCACGAAACGCTGC TGGCCGCCGGCGGCCTGTACGCGCGCTTGCAGGCGCTGCAGGCAGGGGAGGCGGGATGA Protein sequence : MTSPVAQCASVPDSGLLCLVMLARYHGLAADPEQLRHEFAEQAFCSETIQLAARRVGLKVRRHRPAPARLPRAPLPAIAL DRQGGYFVLARFEPGADQAVLIQRPGQAPARLGQAEFEALWAGELLLCACAASPTQALARFDFSWFIPALVKHRHLIGEV LLISLVLQFIALLTPLFFQVVMDKVLVNNAMETLNVIAVGFLAAILFEALLTGIRTYLFAHTSSKLDVELGARLYAHLLR LPLAYFQARRVGDSVARVRELEHIRAFLTGNAVTVLLDVVFSVVFIAVMFFYSVKLTLVVLAALPCYFLLSLVLTPVLRR RLDVKFNRGAENQAFLVETVSGIDTVKSLAVEPQWQRNWDRQLAGYVAAGLSVANVAMLANTGVTLISRLVALGVLWVGA TEVVAQRMTVGELVAFNMLSGHVTQPVIRLAQLWNDFQQTGVSMQRLGDILNCRTEVAGDKAQLPALRGSIELDRVSFRY RPDAADALRNVSLRIAPGEVVGVVGRSGSGKSTLTRLIQRMFVADRGRVLIDGHDIGIVDSASLRRQLGVVLQESTLFNR SVRDNIALTRPGASMHEVVAAARLAGAHEFICQLPEGYDTMLGENGVGLSGGQRQRIGIARALIHRPRVLILDEATSALD YESEHIIQRNMRDICDGRTVIIIAHRLSAVRCADRIVVMEGGEVAECGSHETLLAAGGLYARLQALQAGEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 3e-176 | 53 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 3e-176 | 53 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 3e-176 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cyaB | NP_879579.1 | cyclolysin secretion ATP-binding protein | VFG1269 | Protein | 0.0 | 100 |
| cyaB | NP_879579.1 | cyclolysin secretion ATP-binding protein | VFG1501 | Protein | 2e-176 | 53 |
| cyaB | NP_879579.1 | cyclolysin secretion ATP-binding protein | VFG0907 | Protein | 1e-176 | 53 |
| cyaB | NP_879579.1 | cyclolysin secretion ATP-binding protein | VFG0841 | Protein | 2e-171 | 53 |
| cyaB | NP_879579.1 | cyclolysin secretion ATP-binding protein | VFG1557 | Protein | 2e-176 | 53 |
