Gene Information

Name : DET0857 (DET0857)
Accession : YP_181583.1
Strain : Dehalococcoides ethenogenes 195
Genome accession: NC_002936
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 784053 - 784763 bp
Length : 711 bp
Strand : +
Note : identified by similarity to OMNI:NTL02SC5631

DNA sequence :
ATGAAAAAGTCCAGCCTGGAAGCCATACATCTTCGCCGTTCTTTCCGGAAAGGTGTCCAATCCATACCCGTTTTACAGGA
TATCAATCTGAGGGTTGAGCCGGGTGAAGTGGTGGTTATCCGCGGCAAGAGCGGGGCAGGTAAGTCCGTTCTCCTCTGGA
TATTATCCGGTTTAGACAATCCGGATTCGGGAAAGGTGCTTTTTGACGGGCGGGAATTAAATACACTTGGCAATTCGCAG
CGTTCTGAACTCCGCCGAAGCCGCCTGGGCATTATTTTCCAGAATTTCAATCTGATTGGTTCGTGGAATACATATGAAAA
CGTGGCAATCGTTTTGCGTAATTCCGCACTCTCGCCACTTGAAAAATCAGAGCGGATTCACCGTATTTTAGCGGATTTGG
GACTATCGGACAGGCTTCAAAACCTGCCCGCCGAGCTAAGTATCGGGCAGCAGCAAAGGGTGGCTATTGCCCGGACACTG
GCCGCCAAACCCGAAATAATACTGGCAGATGAGCCCACCGGTGATGTAGACCCCGAAACCGGGGCTGAAATAATAGAGAT
GCTGCTCTCACCGGTAAAAGCAGGCAAAGCCGGGTTGGTAGTAGCTACCCACGGCAATTTCCCTCTAGCGGTTGCTACCA
GGGTATATACCCTAAGCGATGGTGTTTTAATACCGTTTGAACCTTCTACTGCCTCCGCTGCCCAATCCTGA

Protein sequence :
MKKSSLEAIHLRRSFRKGVQSIPVLQDINLRVEPGEVVVIRGKSGAGKSVLLWILSGLDNPDSGKVLFDGRELNTLGNSQ
RSELRRSRLGIIFQNFNLIGSWNTYENVAIVLRNSALSPLEKSERIHRILADLGLSDRLQNLPAELSIGQQQRVAIARTL
AAKPEIILADEPTGDVDPETGAEIIEMLLSPVKAGKAGLVVATHGNFPLAVATRVYTLSDGVLIPFEPSTASAAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DET0857 YP_181583.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-33 42
DET0857 YP_181583.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-34 41