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Name : rnhA (HD1206) Accession : NP_873664.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 981501 - 981962 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAATCAGTTAACATTTTTACCGATGGTTCTTGTTTGGGAAATCCTGGTCCTGGCGGAATTGGTGTAGTATTACGTTA TAATCAGCATCAGAAAAAAGTGAGTCAAGGATATTTTCAAACAACGAATAATCGTATGGAATTACGCGCAGTAATTGAAG GGCTTTCAATGTTAAAAGAAGCCTGTAATGTAACCCTTTATTCAGACAGTCAATATATGAAAAATGGGATTACTAAATGG ATCTTTAAGTGGAAAAAATCGAACTGGAAAACAGCAAATGGTAAAGCGGTCAAGAATAAAGATCTTTGGTTATTATTGGA TGAAAAAATTCAAATACATTATATAGAATGGAAATGGGTAAAGGGGCACTCAGGCCATTATGAAAATGAAATATGCGATG AACTGGCTAAACTCGGCGCAAATAACCCAACGTTAGAAGATGTTGGTTATCAGCCCGCATAA Protein sequence : MKSVNIFTDGSCLGNPGPGGIGVVLRYNQHQKKVSQGYFQTTNNRMELRAVIEGLSMLKEACNVTLYSDSQYMKNGITKW IFKWKKSNWKTANGKAVKNKDLWLLLDEKIQIHYIEWKWVKGHSGHYENEICDELAKLGANNPTLEDVGYQPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-42 | 61 |
