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Name : secF (HD1753) Accession : NP_874119.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1464807 - 1465781 bp Length : 975 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGTCAGCTATTCAACAAGAAAAAGATATGTCAGACATTAAACTGCCATATAAATTAATTCCATTTATGAAATACCGTTA TTTCGGTTTTTTATTCTCATTTATTGTTACTGGATTATGTATATTTTCCATTGTGACCAAAGGCTTTAACTGGGGGTTAG ATTTTACCGGTGGGACAGTGATCGAAACGACTTTCTCACAACCTGCCAATTTAGCTGAAATCAGAACCTTACTTAAGCAA AATGGTTATGAAAGTGCGTTAGTTCAAACAACTGGAAGCCAAAAAGAATTAATGATTCGCTTACCTGCCTCAGCGGGTGA TATGTCATTAGGTAATAAGATAATGGATTTAGTCCATCGCGATCTTGATGCTAATGCTATCATTAAAAGCGTTGAGTTTG TCGGCCCCAATGTTGGTGAAGAATTAACACAAGGTGCCATTTGGGCCACGTTGGCAACACTTGGAATGTTATTACTTTAC GTTGGTACACGTTTTGAAATCCGCTTAGCAATTGGTGGTATCTTAGCCCTATTCCACGATGTGTTAGTTACTGTTGGCTT GTTTTCATTTTTACAGATTGAAATTGATCTAACGTTTGTAGCGGCAATTTTATCCGTTGTAGGATATTCATTGAATGACT CGATCGTAGTTTTTGACCGTGTCCGTGAAAACTTCAGTAAAATTCGCCGAGTAACTTCGATAGAGATCATTGATATTTCA TTGAGCCAAACGCTCTCTCGTACACTAATGACGTCAATCACCACGCTATTTGTAGTCTTGGCATTATTTTTATTCGGTGG TCCAACAATCCATAGCTTTTCACTTGCCTTATTAATTGGTATTGGCTTTGGTACTTATTCATCTATCTATGTCGCGATTG GGGTGGCATTACAATTAGGTTTAGATCGTGAACATATGATCAAGCCGGTGGTTGAAAAAGAAGGTGCGGATCAACAATCA TTTATTGATTACTAA Protein sequence : MSAIQQEKDMSDIKLPYKLIPFMKYRYFGFLFSFIVTGLCIFSIVTKGFNWGLDFTGGTVIETTFSQPANLAEIRTLLKQ NGYESALVQTTGSQKELMIRLPASAGDMSLGNKIMDLVHRDLDANAIIKSVEFVGPNVGEELTQGAIWATLATLGMLLLY VGTRFEIRLAIGGILALFHDVLVTVGLFSFLQIEIDLTFVAAILSVVGYSLNDSIVVFDRVRENFSKIRRVTSIEIIDIS LSQTLSRTLMTSITTLFVVLALFLFGGPTIHSFSLALLIGIGFGTYSSIYVAIGVALQLGLDREHMIKPVVEKEGADQQS FIDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 1e-55 | 49 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 2e-55 | 48 |
