Gene Information

Name : glcB (MAP1549c)
Accession : NP_960483.1
Strain : Mycobacterium avium K-10
Genome accession: NC_002944
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 1700591 - 1702795 bp
Length : 2205 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACTGATCGCGTGTCGGCGGGGAACCTGCGCGTCGCCCGAGTGCTTTACGACTTCGTGAACGACGAGGCCTTGCCCGG
CACCGACATCGACCCGGACAGCTTCTGGGCGGGCGTCGACAAGGTGGTCACCGACCTCACCCCCAGGAACCAGGAGCTGC
TGCGCCGCCGCGACGAGCTGCAGGCCCAGATCGACAAGTGGCACCGCCAGCGCGTCATCGAGCCGCTCGACATCGATGCC
TACCGCGACTTCCTCATCGAAATCGGTTACCTGCTGCCCGAACCCGAGGACTTCACCATCACCACCTCCGGGGTGGACGA
CGAGATCACCACCACCGCGGGCCCGCAGCTGGTGGTGCCCGTGCTCAACGCCCGGTTCGCGCTGAACGCCGCCAACGCCC
GGTGGGGCTCGCTGTACGACGCGCTGTACGGCACCGACGTGATCCCCGAAACCGACGGCGCCGAAAAGGGATCGAGCTAC
AACAAGGTTCGCGGCGACAAGGTGATCGCCTACGCCCGCAACTTCCTCGACCAGGCGGTGCCGTTGGAATCGGGTTCCTG
GGCCGACGCGACCGGGTTGTCCGTCGAGGACGGCCGCCTGCAGGTGGCGACCGCCGACGGTTCCGTCGGCCTGGCCGAGC
CGGCGAAGTTCGCCGGCTACACCGGGCAGCTCGGGTCGCCGGACTGGTCGGTGCTGCTGGTCAATCACGGCCTGCACATC
GAGATCCTCATCGACCCGCAGTCACCGGTCGGCAAGACCGACCGCGCCGGCATCAAGGACGTGGTGCTGGAATCGGCCGT
CACCACGATCATGGACTTCGAGGACTCGGTGGCCGCCGTCGACGCCGACGACAAGGTGCTCGGCTACCGCAACTGGCTCG
GCCTGAACAAGGGCGACCTGTCCGAAGAGGTCAGCAAGGACGGCAAGACCTTCACCCGGGTGCTCAACGCCGACCGCACC
TACACCACCCCCGACGGCCAGGGCGAGCTGACCCTGCCGGGCCGCAGCCTGCTGTTCGTCCGCAACGTCGGGCACCTGAT
GACCAACGACGCCATCGTGTGGAGCGACGGCGACGAGGAAAAAGAGGTGTTCGAGGGCATCATGGATGCGCTGTTCACCG
GCCTGACGGCGATCCACGGGCTCAAGACCGGCGAGGCGAACGGGCCGCTGCAGAACAGCCGCACCGGCTCCATCTACATC
GTCAAGCCCAAGATGCACGGGCCCGACGAGGTCGCGTTCACCTGCGAGCTGTTCAGCCGGGTGGAGGACGTCCTGGGCCT
GCCGCAGGGCACCCTCAAGATCGGCATCATGGACGAGGAACGGCGCACCACCGTCAACCTCAAGGCCTGCATCAAGGCCG
CGGCCGACCGGGTGGTGTTCATCAACACCGGCTTTTTGGACCGCACCGGCGACGAGATCCACACCTCGATGGAGGCCGGG
CCGATGATCCGCAAGGGTGCGATGAAGAACACCACCTGGATCAAGGCCTACGAGGACGCCAACGTCGACATCGGGCTGGC
CGCCGGCTTCAAGGGCAAGGCCCAGATCGGCAAGGGCATGTGGGCGATGACCGAACTGATGGCCGACATGGTCGAGCAGA
AGATCGGCCAGCCCAAGGCGGGCGCCACCACCGCGTGGGTGCCCTCGCCGACGGCGGCCACCCTGCACGCCATGCACTAC
CACTACGTCGACGTGGGCGCGGTGCAGGAGGAGCTCGCCGGCAAGAAGCGCACCACCATCGAACAGCTGCTCACCATCCC
GCTGGCCAAGGAGCTGGCCTGGGCTCCCGAGGAGATCCGCGAGGAGGTGGACAACAACTGCCAGTCCATCCTCGGCTACG
TGGTGCGCTGGGTCGCCCAGGGGGTCGGCTGCTCGAAGGTGCCCGACATCCACGACGTGGCGCTCATGGAAGACCGTGCC
ACACTGCGGATTTCGAGCCAGCTGCTGGCCAACTGGCTGCGCCACGGGGTGATCACCGAGGAGGACGTGCGGGCCAGCCT
GGAGCGGATGGCGCCGCTGGTGGACGCCCAGAACGCCAAGGACGCCGCCTATCAGCCGATGGCGCCCAACTTCGACGACA
GCCTGGCGTTCCTGGCCGCTCAGGATCTGATCCTGACCGGCACGCAGCAGCCCAACGGCTACACCGAGCCGATCCTGCAC
CGCCGCCGGCGCGAGGTTAAGGCCCGCGCCGCGCAGTCGAATTGA

Protein sequence :
MTDRVSAGNLRVARVLYDFVNDEALPGTDIDPDSFWAGVDKVVTDLTPRNQELLRRRDELQAQIDKWHRQRVIEPLDIDA
YRDFLIEIGYLLPEPEDFTITTSGVDDEITTTAGPQLVVPVLNARFALNAANARWGSLYDALYGTDVIPETDGAEKGSSY
NKVRGDKVIAYARNFLDQAVPLESGSWADATGLSVEDGRLQVATADGSVGLAEPAKFAGYTGQLGSPDWSVLLVNHGLHI
EILIDPQSPVGKTDRAGIKDVVLESAVTTIMDFEDSVAAVDADDKVLGYRNWLGLNKGDLSEEVSKDGKTFTRVLNADRT
YTTPDGQGELTLPGRSLLFVRNVGHLMTNDAIVWSDGDEEKEVFEGIMDALFTGLTAIHGLKTGEANGPLQNSRTGSIYI
VKPKMHGPDEVAFTCELFSRVEDVLGLPQGTLKIGIMDEERRTTVNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAG
PMIRKGAMKNTTWIKAYEDANVDIGLAAGFKGKAQIGKGMWAMTELMADMVEQKIGQPKAGATTAWVPSPTAATLHAMHY
HYVDVGAVQEELAGKKRTTIEQLLTIPLAKELAWAPEEIREEVDNNCQSILGYVVRWVAQGVGCSKVPDIHDVALMEDRA
TLRISSQLLANWLRHGVITEEDVRASLERMAPLVDAQNAKDAAYQPMAPNFDDSLAFLAAQDLILTGTQQPNGYTEPILH
RRRREVKARAAQSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 57