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Name : PP_3086 (PP_3086) Accession : NP_745230.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : RNA polymerase sigma-70 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3473598 - 3474104 bp Length : 507 bp Strand : - Note : identified by match to PFAM protein family HMM PF00776 DNA sequence : ATGCCACCCGCCGAACCTAGCCTCAACCTGCAGGTCCAGACGCTGTACACCGAGCACCATGGCTGGCTGCAGGGTTGGCT GGGCCGTAAACTGGGCAATGCCTGCGATGCCGCCGACCTGGCTCACGACACGTTCGTGCGCTTGCTCAGCCGCCAAGGCA ACCCCTACTTTGGCAACGAACCCCGGGCCTTGCTTACTCATATAGCCAAGGGCCTGGTGGTCGACCGCTGGCGCCGCCAG GATGTCGAGCGGGCCTACCTGGAGGCCATCGCCCATTTGCCGCAACCCGAGGTGCCTTCGCCGGAAACGCGCTGGCTGAT CCTTGAAACCCTGTACCGCATCGACGCCATGCTGCGCGACATGCCGGCGCGGGTACGTCAGGTGTTCCTGCTGTCACAGC TGGACGGCCTGACCTACGCCCAAATCGCCGAACAGCTGCAGGTTTCGCTGATCACGATCAAGCGCGACATGCGTACGGCA TTCCTTGCCTGCCTGAGCATCGAGTGA Protein sequence : MPPAEPSLNLQVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVDRWRRQ DVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTA FLACLSIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 7e-30 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP_3086 | NP_745230.1 | RNA polymerase sigma-70 factor | VFG1049 | Protein | 3e-30 | 46 |
