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Name : PP_3316 (PP_3316) Accession : NP_745459.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : chaperone-associated ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3751057 - 3753879 bp Length : 2823 bp Strand : - Note : identified by match to PFAM protein family HMM PF02861 DNA sequence : GTGCTGCGGCAGGCTCCATCTCGTCATCTCAATGACTCAAGGAGCGCCCGCATGGCCAGCAAACAATGCCAGGTCTGTGG CCAACCCGCCACGACACGGGTGGAGGCCAAGGTCAATGGCCGCCACAGCATCATGCTGTTGTGTGATGATCACTACCGCC AATTGGTGCGCCAGCAAAAACGCACCCTTTCCCCACTGGAAGCCCTTTTCGGCTCGCGCAGCGGTTTGTTCGAAGAGTTC ATGGGCAGCGATTTGCTGCGCATCGGAGAAGACTCGGCATCCGTTGCCACGGATGCCGATGAAGTGGCTGAAGCGTCGTC TGGGGAACCTGGCCGCGCAGCGTCCGGCACGCCACGCCGCCGCAGCAGCGGGCTGGCCAGCCGCATCAGCGAACACTCCG AGGCCCTGTTGCAGGAAGCCGCCAAGCGTGCCACGGAGTTCGGTCGGTCCGAAGTCGACACCGAACACCTGCTATTGGCG CTGGCCGACAGCGACGTGGTGAAGACCATCCTGAGCCAGTTCAAGATCAAGGTTGATGAGCTCAAGCGCCAGATCGAAGC CGAAGCCAAGCGCGGCGACAAGCCATTTGAAGGCGAAGTCGGCGTGTCGCCTCGGGTCAAGGATGCGCTCAGTCGCGCCT TCGTCGCCTCCAATGAGTTGGGGCACGCATACGTAGGCCCCGAGCACTTCTTGATCGGGCTGGCCGAAGAGGGCGAAGGG CTGGCCGCCAACTTGCTGCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGTGGTTGGCAAGGG TGCAGAGGATGGTCGCGCCGAGGCACCGACCGAAACGCCGGAGCTCGACAAGTACTCGCGCGATCTCACCAGGATGGCGC GCGATGGCAAGCTGGACCCGGTCATCGGGCGGGCACAGGAAATCGAAACCACCATTGAGGTACTGGCGCGGCGCAAGAAG AACAACCCGGTGTTGATCGGCGAGCCTGGCGTGGGCAAGACGGCCATCGTCGAGGGGCTGGCGCAGCGCATGGTGGCCGG CGAGGTGCCCGAGACGCTGCGCGACAAGCGCCTGGTCGAACTGAACATCAATTCGTTGGTGGCTGGCGCGAAGTACCGAG GCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTGAAGGAAATCGCCGAGCATCAGGGCGAGCTGATTCTCTTCATCGACGAA GTGCACACCATCGTCGGGGCAGGCCAGGGCGGTGGAGAAGGCGGCTTGGACGTGGCCAACGTCTTCAAGCCGATGATGGC GCGTGGTGAGCTGAACCTGATTGGCGCGACGACGCTCAACGAGTACCAGAAGTACATCGAGCAGGACGCTGCGCTGGAGC GGCGTTTCCAACCGGTCGTGGTGCCCGAGCCAACGGTGGCGCAGACCATCATGATCCTGCGCGGCCTGCGCGACACCTTC GAAGCGCACCACAAGGTCAGCATCACCGAGGAGGCGATCATCGCTGCCGCCGAACTGTCCGACCGCTACGTCAGCGCGCG CTTTCTGCCGGACAAGGCCATCGATCTGCTCGATCAGGCTGCCGCCCGCGTCAAGTTATCGGCGACGGCGCGTCCGGTTG CGGTGCAGGAAATGGAGTCGGAGTTGCACCAGTTGCGCCGCGAGCAGGACTACGCGGCTTCGCGCAAGCAATATGACAAT GCGGCGCAGATCAGCAAGCGCGTCGAAGCCACGGAGGCCGAACTCAAGCAGCGGGTCGAGGAGTGGGAGCGCGAGCGCGG CTCGGGCAGCACCGAGGTCAAGGCGGAACATGTGGCGCAAATCGTCTCGCGGCTAACCGGCATTCCGGTCAATGAACTGA CGGTGGAGGAGCGCGAGAAGCTGTTGCACCTGGAGCAGCGGCTGCATGAGCGCCTGGTGGGGCAGGACGAGGCGGTGCGT GCGGTGGCGGACGCGGTTCGGCTGTCGCGCGCTGGGCTGCGCGAAGGCAGCAAGCCCGTTGCCACGTTCCTGTTCCTGGG CTCCACCGGTGTCGGCAAGACCGAGCTGGCCAAGGCGCTGGCCGAAACCATCTACGGCGACGAGAGCGCCCTGTTGCGTA TCGACATGTCAGAGTATGGCGAGCGCCATTCCGTGGCTCGGCTGGTGGGCGCGCCTCCGGGTTACGTTGGTTATGACGAA GGCGGCCAGCTTACCGAAAAGGTCCGGCGCAAGCCCTATAGCGTGCTGCTGCTCGACGAAATCGAGAAGGCCCACGCCGA CGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGACTGACCGATGGCAAGGGGCGCGTGGTGGACTTCACCAACA CCATTATCATCGCCACGTCCAACCTGGGCTCCGACATTATTCAGCGGCGGCTGAAGGCGCCTGGAGCGGCTGGTGAGGAG TACGAGAAGACCAAGGTCGAGGTGATGGAAGTGCTGCGCGGGCACTTTCGCCCCGAGTTCCTCAACCGAATCGATGAGAT CATCGTCTTCCATGCGCTGGGCAAGCAGGAGATCCGCCACATTGTTGGCCTGCAACTTGAGCGCGTAGCCCGCAATGCCG CGAGCCAGGGCGTGACGCTGACGTTCGACGAGACACTGGTCGATCACTTGGCGCAAGTCGGCTACAAGCCCGAATTCGGT GCCCGCGAGCTCAAGCGACTGATCCGCAGCGAGCTGGAGACGGCACTGGCACGTGAAATGCTCGGCGGCGGCATTGGCAA GGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAG AGCTCGACAGTGAAAATGCGTGA Protein sequence : MLRQAPSRHLNDSRSARMASKQCQVCGQPATTRVEAKVNGRHSIMLLCDDHYRQLVRQQKRTLSPLEALFGSRSGLFEEF MGSDLLRIGEDSASVATDADEVAEASSGEPGRAASGTPRRRSSGLASRISEHSEALLQEAAKRATEFGRSEVDTEHLLLA LADSDVVKTILSQFKIKVDELKRQIEAEAKRGDKPFEGEVGVSPRVKDALSRAFVASNELGHAYVGPEHFLIGLAEEGEG LAANLLRRYGLMPQALRQCVSKVVGKGAEDGRAEAPTETPELDKYSRDLTRMARDGKLDPVIGRAQEIETTIEVLARRKK NNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDE VHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQTIMILRGLRDTF EAHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQAAARVKLSATARPVAVQEMESELHQLRREQDYAASRKQYDN AAQISKRVEATEAELKQRVEEWERERGSGSTEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVR AVADAVRLSRAGLREGSKPVATFLFLGSTGVGKTELAKALAETIYGDESALLRIDMSEYGERHSVARLVGAPPGYVGYDE GGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAPGAAGEE YEKTKVEVMEVLRGHFRPEFLNRIDEIIVFHALGKQEIRHIVGLQLERVARNAASQGVTLTFDETLVDHLAQVGYKPEFG ARELKRLIRSELETALAREMLGGGIGKGDHAHVRWDDKAERVGFDRRQAAPAKELDSENA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-161 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-92 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP_3316 | NP_745459.1 | chaperone-associated ATPase | VFG0079 | Protein | 5e-172 | 50 |
