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Name : glcF (PP_3747) Accession : NP_745878.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 4276603 - 4277838 bp Length : 1236 bp Strand : + Note : similar to SP:P52074, GB:X53463, SP:P18283, and PID:579930; identified by sequence similarity DNA sequence : ATGCAAACCAACCTTAGCGAAACATCGCGCCGCCTGGCCCGCGCCGACGAAGCCGAGCGCATCCTGCGCACCTGTGTACA TTGCGGTTTCTGCACCGCCACCTGCCCCACTTACCAGTTGCTGGGCGACGAACTGGACGGCCCGCGCGGGCGCATCTACC TGATCAAGCAGATGCTCGAAGGCGAGCCGGTCACCGCCAGCACCCAATTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGATCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCC ACGCCCGCTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCC GCAGCGGCCAGGTGCTGCGCCCGCTGCTACCGGCCTCAGTCAAACGCAAGTTGCCGGCGCAAGTCACCACACCGGGCCAG CGTCCGGCAGTGCGCCATGCACGCCGGATACTGATGCTGGAAGGCTGCGTGCAGCCGGCCCTGTCACCCAATACCAATGC CGCTGCTGCGCGGCTGCTCGACCGCCTGGGTATCAGTGTGCAACCGGTCCGGCAGGCCGGATGCTGTGGCGCGGTGGACT ATCACCTGAATGCCCAGGAGCAAGGCCTGCAGCGGGCACGGCGCAATATCGACGCCTGGTGGCCCGCCATCGAAGCGGGT GTCGAGGCTATCGTGCAGACCGCCAGCGGCTGCGGTGCGTTTGTCCGCGACTATGGCCACCTGCTGGAAAAAGACCCCCA TTACGCTGCCAAGGCCGCCCGGGTCAGCGCCCTTTCCCGCGATCTGGTGGAAATCCTGCGCGATGAGCCGATCGAACAAT TGGCCCTGTGCGCCGAACAGCGCCTGGCCTTCCACTGTCCATGCACCCTGCAGCACGCACTGAAGCTGGGCGGCGCGGTA GAGGCGTTGCTGACACGGCTTGGCTTTACCCTGACCTCGGTGCCCGATGGCCACCTGTGCTGCGGCTCGGCAGGCACCTA TTCGCTGACCCAGCCAGAACTGTCACTGCAACTACGCGACAATCGTCTGAATGCGCTGGAAAGCGGTAAACCGCACCTCA TTGCCACAGCCAACATAGGCTGCCAGGCCCACCTCGACGGAGCTGGACGCACGCCCGTGCGCCACTGGGTCGAAATCGTC GAAGCAGCCTTGAACCCGGAGCCCGCCCATGCTTAG Protein sequence : MQTNLSETSRRLARADEAERILRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQLHLDRCLTCRN CETTCPSGVKYHDLLDIGRAVVEQQVPRPLGQRLLRLGLRAVVPRPALFKALTRSGQVLRPLLPASVKRKLPAQVTTPGQ RPAVRHARRILMLEGCVQPALSPNTNAAAARLLDRLGISVQPVRQAGCCGAVDYHLNAQEQGLQRARRNIDAWWPAIEAG VEAIVQTASGCGAFVRDYGHLLEKDPHYAAKAARVSALSRDLVEILRDEPIEQLALCAEQRLAFHCPCTLQHALKLGGAV EALLTRLGFTLTSVPDGHLCCGSAGTYSLTQPELSLQLRDNRLNALESGKPHLIATANIGCQAHLDGAGRTPVRHWVEIV EAALNPEPAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 2e-139 | 73 |
