|
Name : rnhA (PP_4142) Accession : NP_746260.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 4679508 - 4679954 bp Length : 447 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAGCGATAGCGTCGAGATGTTTACTGATGGTGCCTGCAAGGGCAACCCTGGCCCGGGTGGCTGGGGCGTGCTGATGAT CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGTGAGACCACCAACAACCGCATGGAGCTGATGGCTGCGATCC AGGGCCTGATGTCGCTCAAGCGTGAATGCGAGGTGGTGCTGACCACCGACTCGCAGTACGTGATGAAGGGCATCAACGAA TGGATGGTCAACTGGAAGAAGCGTGGCTGGAAGACCGCCGCCAAGGAGCCGGTGAAGAACGCTGACTTGTGGCAGCAGCT CGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCATATTGGCCACCCCGGCAACGAACGCGCCG ACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGA Protein sequence : MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECEVVLTTDSQYVMKGINE WMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 6e-39 | 60 |
