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Name : PP_4927 (PP_4927) Accession : NP_747030.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : toxin secretion ABC transporter protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 5605938 - 5608133 bp Length : 2196 bp Strand : - Note : identified by match to PFAM protein family HMM PF04144 DNA sequence : TTGCTTCGGGCTAGTATCGCCTCATGTCCGGTTTTCATAAGAGGTGGCGTGATGGCTGATTTATCTGATGGCAATGCCAA CACTATTGAAAGTGGGCTGGTGTGTCTTATCACGCTGGCGCGTTACCATGGTGTTGCCGTCTCTGCCGAGCAGTTGCAGC ACGATCATGCAGCAGCGGGTGAGCGTTTCTCCACCGGCCCACTACTTCGGGCATTTCAGCAACTTGGCCTCAAGGCCAAA CACCGCAGCGTCGATCCGGCCCGGCTGCAGCAGACGCCCTTGCCCGCTATTGCAGTGGATACGCGTGGTGAGTACTTCAT CATCGCGCGCGTGGAGGGCGAGCAGGTTCTGGTGCAGGACCCCCATTCCCGCGCGCCGCAAGCGCTGACCCTCGCGGAAC TGTTGGTGCGCTGGTCGGGAGAACTCATTCTGGTTCGCTCCGATGCCCAGTTGCCCCTAGGGCTGTCGCGCTTCGACTTT ACCTGGTTCATTCCTGCTCTGGTGAAGTACAGGCGGCTATTTGGCGAAGTGCTCGTGGTTTCCCTGGTCATTCAGATACT GGCTTTGCTGACGCCTTTGTTCTTTCAGGTGGTAATGGACAAAGTCCTGGTGCATCGCGGTTTGACCACGCTGGATGTTA TCGCCTTGGGTTTATTGGTCGTCGTTCTGTTTGAAACATTGCTGAGTGGGTTGCGTACCTATGTGGCAGCTCATACAGCG TCAAGAATCGATGTCGAACTGGGTGCAAAACTGTTCAGGCATTTGATCGATCTTCCAACCGCCTATTTTCACGCCAGGCG AGTCGGTGACTCGGTTGCCCGAGTGCGAGAACTGGAGAACATCAGAAGTTTCCTGACCAACAACAGCATCACGCTAGTGC TGGATGTGCTGTTCTCGGTGGTCTTCATCGCTGTCATGTTCCTCTATAGCGGATGGTTGACGCTGGTCGTCGTTGGCTCG CTGCCTTTCTATTTTCTCGTATCCCTGGTCGTTACTCCGCTACTGCGGGCGTTGATTGATCAAAGCTTCCAACGCGGCGC CGAGAACCAGGCTTTCTTGGTCGAGGCGGTCAACGGCATCGACACACTGAAGTCGATGGCCGTGGAACCTCAGGTGACCC GGCGCTGGAATGATCAGTTGGCCGCTTATGTATCTGCCAGTTTCAAGACCCAGAACCTTTCCAGTCTCGCCAATGAAAGC GTCGGCCTGATCGGCAAGCTTGTCACGGTAGCCACCTTGTGGCTGGGGGCCCGGCTGGTCATCGAAGGCGCACTCACGGT GGGCGAGCTGATCGCCTTCAACATGCTCGCAGGGCGCGTGTCGCAGCCCATCATCCGCCTGGCCCAACTCTGGACCAGCT TCCAGCAGACAGGGGTATCGATTCAACGCCTGGGCGACATTCTCAACACCCGTACCGAGGTCAACCAAGGCAAGGGCACG GTGCTGCCCACACTTGTCGGGCAGATCGAGCTCGATCGTGTGTGTTTTCGCTATCGGCCGGACGGGGGCGAAGTGGTGCG CGATGTCAGCCTGAAGATCGCCGCCGGAGAAGTGATAGGCGTTGTAGGTCGCTCGGGGTCAGGCAAGAGCACGCTGACAC GCTTGATTCAGCGGCTGTACTCACCTGAGCGGGGGCGGGTATTGCCCGACGGTGCTGACCTGGCGGTAGCCGATGTGGCG TCACTGCGTCGGCAGATCGGCGTGGTGTTGCAGGACAACGTGCTTTTTCGGCGCACCGTGCGCGAGAACATTGCCCTCGG CAACCCAGCAGCACCGCTTGAAGAAGTAATCGCCGCAGCGACGCTGGCGGGTGCGCACGAGTTCATCCTCGAATTACCGG ATGGCTACGAAACCCTGATTGGTGAGCACGGCGCCAGCCTGTCGGGTGGGCAGCGACAGCGCATAGCCATCGCCCGAGCG CTGTTCGGCAACCCACGCATCCTCATTTTCGACGAAGCCACCAGTGCGCTGGACTATGAGTCCGAACGGATCATCCAGCA GAACATGGCGCGGATTTGCGCGCAGCGCACGGTCATCATCATTGCCCATCGGCTTTCGGCAGTACGCCATGCCGACCGCA TCGTGGTCATGGAGCGTGGGCAGATCATCGAGCAAGGGACTCATGATGAGCTGCTGGGTTATCCACAGGGCACCTATGCC TACCTGCATCAACTGCAGCTCGGGGCCGCCGTATGA Protein sequence : MLRASIASCPVFIRGGVMADLSDGNANTIESGLVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGPLLRAFQQLGLKAK HRSVDPARLQQTPLPAIAVDTRGEYFIIARVEGEQVLVQDPHSRAPQALTLAELLVRWSGELILVRSDAQLPLGLSRFDF TWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTA SRIDVELGAKLFRHLIDLPTAYFHARRVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGS LPFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSASFKTQNLSSLANES VGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGT VLPTLVGQIELDRVCFRYRPDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVA SLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGASLSGGQRQRIAIARA LFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRLSAVRHADRIVVMERGQIIEQGTHDELLGYPQGTYA YLHQLQLGAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 56 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 56 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP_4927 | NP_747030.1 | toxin secretion ABC transporter protein | VFG1269 | Protein | 0.0 | 62 |
| PP_4927 | NP_747030.1 | toxin secretion ABC transporter protein | VFG0907 | Protein | 0.0 | 56 |
| PP_4927 | NP_747030.1 | toxin secretion ABC transporter protein | VFG1557 | Protein | 0.0 | 56 |
| PP_4927 | NP_747030.1 | toxin secretion ABC transporter protein | VFG1501 | Protein | 0.0 | 56 |
| PP_4927 | NP_747030.1 | toxin secretion ABC transporter protein | VFG0841 | Protein | 0.0 | 55 |
