Gene Information

Name : PP_0704 (PP_0704)
Accession : NP_742865.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 818158 - 818673 bp
Length : 516 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGATCAACGACACGCTCAAGCCCACCGAGGTCGCTCTGCTCTACCAGTCTCACCATACCTGGTTGCGCGGCTGGTT
ACGCAGCCGGGTCGGTTGCAGTGAACATGCCGCAGACCTGGCCCAGGATACCTTCGTGCGGTTGTTGCGCGCCCGCCAGA
TGTCGCCGCTCAAAGAACCGCGCGCCTACCTCAGCAGCATCGCCCGTGGCTTGATGATCGACCAGTTCCGCCGCCGCGCG
CTGGAGCGGGCCTACCAGGAGGGCCTGGCTCACCTGCCCGAAGCAGAAGTGCCCAGCGAAGAGGATAAGCTTGTCATCCT
CGATAGCCTGGAACGCCTCGACCGCGCCTTGCAGCAGTTGAAACCGCGCGTCCGCCAAGCGTTCCTGCTGGCCCAGCTAG
ACGGTTTGAGCATCGTGCAGGTTGCCCAACGTCTGGGGGTGTCCAGGGCCACCGTTGAGCGCGACCTGGCCAAAGCCCTG
GGCGCCTGCTACCGGTTGCGCTATGCCGATGCCTGA

Protein sequence : 
MQINDTLKPTEVALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMIDQFRRRA
LERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLAQLDGLSIVQVAQRLGVSRATVERDLAKAL
GACYRLRYADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_0704 NP_742865.1 ECF subfamily RNA polymerase sigma factor VFG1049 Protein 2e-34 44