|
Name : secF (PP_0836) Accession : NP_742997.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 973580 - 974488 bp Length : 909 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAAACCATCAATTTCATGGGTGTGCGCAATGTCGCGTTCGCCGTCACCGTGCTCCTCACCGTGTTGGCGCTGTTCAG CTGGTGGCAAAAGGGCCTGAACTTCGGGCTGGACTTCACCGGGGGTACGCTGATCGAGCTGACCTACGAGCGCCCGGCCG ACGTCAAGGCTGTGCGTGCCGAGTTGGTCGAATCCGGCTTCAACGAGGCCGTGGTGCAGAGCTTCGGTGCTACCACTGAC CTGCTTGTGCGCATGCCTGGCGACGATCCCATGCTGGGTAACAAGGTAGCTGAAGCCCTGCAGAAGGCTGGAGGTGACAA CCCGGCGAAGGTCAAGCGTGTCGAGTTCGTCGGCCCTCAGGTGGGTGAAGAGCTGCGTGACCAGGGTGGCATAGGCATGT TGCTGGCCTTGGGCGGCATCCTCATCTACCTGGCGTTCCGTTTCCAGTGGAAGTTCGCCGTGGGGGCGATCGTTTCGCTG ATCCACGACGTGGTGGTAACGCTGGGTATCCTGTCGTTCTTCCAGATCACCTTCGACCTGACGGTGCTGGCGGCGGTGCT GGCGATCATCGGTTACTCGCTGAACGACACCATCGTTGTGTTCGACCGGGTACGTGAAAACTTCCGCGTCATGCGCAAGG CCTCATTGATCGAGAACATCAACGTTTCCACCACCCAGACCCTGCTGCGTACCGTCGCCACTTCGGTTTCGACCTTGCTG GCCATTGCCGCGCTGCTGTTCTTCGGGGGTGACAACCTGTTCGGTTTCTCGTTGGCCCTGTTCATTGGTGTCATGGCCGG TACCTACTCGTCGATCTATATCGCCAACGTGGTACTGATCTGGCTGAACCTGAGCAGCGAGGATCTCATTCCGCCGGTCA AGGCCGAAGGTGTGGACGAACGTCCGTAG Protein sequence : MKTINFMGVRNVAFAVTVLLTVLALFSWWQKGLNFGLDFTGGTLIELTYERPADVKAVRAELVESGFNEAVVQSFGATTD LLVRMPGDDPMLGNKVAEALQKAGGDNPAKVKRVEFVGPQVGEELRDQGGIGMLLALGGILIYLAFRFQWKFAVGAIVSL IHDVVVTLGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVMRKASLIENINVSTTQTLLRTVATSVSTLL AIAALLFFGGDNLFGFSLALFIGVMAGTYSSIYIANVVLIWLNLSSEDLIPPVKAEGVDERP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 4e-92 | 86 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 3e-92 | 86 |
