|
Name : PP_0839 (PP_0839) Accession : NP_743000.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 976288 - 977043 bp Length : 756 bp Strand : + Note : identified by match to PFAM protein family HMM PF00588 DNA sequence : TTGCTGCAAAATATTCGTGTTGTTCTGGTCAATACCAGCCACCCCGGCAACATCGGCGGCGCTGCACGTGCCATGAAAAA CATGGGCTTGTCGCGTCTGGTGCTGGTGCAGCCGAAAGAATTCCCCGCCGTGGATGCCAGTGCCCGTGCTTCGGGCGCCG ACGATGTGCTGGATAACGCCCAGGTGGTCGACAGTCTCGAACAGGCGCTGGTCGGCTGTAACCTGGTGATGGGCACCAGC GCCCGCGAGCGCAGCATTCCCTGGCCGTTGATCGGCCCGCGTGAATGCGGTGCCAAGGCGGTGGAGCATGCCAATGGCGG CGAGGAAATCGCCCTGGTGTTCGGGCGCGAGCACGCCGGCCTGACCAACGAAGAACTGCAGCGATGTCATTTCCACGTGC ACATTCCCTCCAACCCCGACTTCAGCTCGCTGAACCTGGCGGCTGCCGTGCAGGTGCTCTCCTACGAGGTGCGCATGGCC TGGCTGGCTGCCGGTGAAGCACCGGGCAAAGTCGAGAAGGTTGACGCCGCTGAGCTGGCGACCATGGATGAAATGGAGCT GTTCTACGACCACCTGGAGAAAACCCTGGTGGGCATCGGCTTCCTCGACCCCGAAAAGCCCAAGCACCTGATGCCGCGCC TGCGCCGGCTGTATGGGCGGGTGGCGGTCGAGCGTTCGGAAATGAGCATTTTGCGCGGCATCCTCACCGAGACCCAGAAG GTGGTCCGGGGCGAGCCGCATAAACGGAAGGACTGA Protein sequence : MLQNIRVVLVNTSHPGNIGGAARAMKNMGLSRLVLVQPKEFPAVDASARASGADDVLDNAQVVDSLEQALVGCNLVMGTS ARERSIPWPLIGPRECGAKAVEHANGGEEIALVFGREHAGLTNEELQRCHFHVHIPSNPDFSSLNLAAAVQVLSYEVRMA WLAAGEAPGKVEKVDAAELATMDEMELFYDHLEKTLVGIGFLDPEKPKHLMPRLRRLYGRVAVERSEMSILRGILTETQK VVRGEPHKRKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 6e-95 | 76 |
