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Name : clpB (PG1118) Accession : NP_905329.1 Strain : Porphyromonas gingivalis W83 Genome accession: NC_002950 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1192173 - 1194764 bp Length : 2592 bp Strand : - Note : - DNA sequence : ATGAACATTAACAACTACACAATCAAATCGCAGGAGGCTCTACAGCAGGCTGTGGAGCTGACCCGTCGGCACGGACAGCA GGCCATCGAACCGCAGCACCTGCTCAAGGCCGTTATGGATCAGGGCGAAAGCCTGACCGATTTCCTTTTTGCCAAGATGG GGCTGAACAAGGGCAGTATCGCCACGGCTGTGGACAAACTGATAGAGAAACTGCCCCATGTATCGGGTGGCGAACCCTAT CTGTCGCATGAGACCAATCAGGTGCTACAGGCAGCGGAGGACGCAGCGCACCGGATGAAGGACAAATACGTCTCTTTGGA GCACATCGTGCTGGCTATTCTGACTACGCGATGCGAGGCGTCCACTCTGCTCAAGGATGCCGGAGCCACCGAACAGCTTC TGCAGTCGGCCATCGAAGAGCTTCGGAAGGGGCGCAACGTGACCAGTCAGAGTGCGGAGGAACAGTACAATGCACTGGAG AAATATGCCGTCAATCTCTGTCAGCGTGCTCGCGATGGCAAGTTGGATCCCGTGATCGGTCGCGATGACGAGATCAGGCG AGTGCTGCAAATTCTCTCTCGACGCACCAAGAACAATCCTATCCTTATCGGTGAGCCGGGGGTGGGCAAGACGGCCATAG CCGAGGGCTTGGCTTACAGGATCGTGCGTGGCGACGTGCCGGAGAATCTGCGCAACAAGCAGATATTCTCTCTCGACATG GGTGCCTTGATCGCCGGAGCCAAATACAAAGGTGAATTCGAGGAAAGGCTGAAAGCCGTGGTAAACGAAGTGACCGGTGC CGAGGGGGAAATCATCCTTTTCATAGATGAGATCCACACCCTTGTCGGAGCCGGCAAGAGCGAAGGCGCGATGGACGCTG CCAACATACTGAAGCCGGCCCTGGCTCGGGGCGAACTCCGTGCCATCGGTGCCACCACGCTGGACGAATACCGCAAATAC TTCGAGAAGGACAAGGCTCTGGAACGACGCTTCCAGATGGTGATGGTGGACGAGCCGGACGAGCTAAGCTCCATCTCCAT CCTCCGGGGTTTGAAGGAGAAATACGAGAATCACCACAAAGTGCGGATCAAGGATGATGCCATCATTGCGGCCGTGAAGT TGTCGCACCGCTACATTACGGAGCGGTTCCTGCCCGACAAGGCCATCGACCTGATGGATGAGGCTGCGGCTCGTCTGCGT ATGGAAGTGGATTCGCTGCCGGAGGAGCTGGACGAGATCTCGCGCAGGATCAAGCAACTTGAGATCGAACGCGAAGCCAT CAAGCGAGAGAATGACGAAGAGAAGGTACAGTTCCTCGACAGGGAAATAGCCGAACTCAAGGAGAAAGAGGCCTCGGAGA AAGCCCAATGGCAGAACGAAAAAGATCGGATCAATCAGATTCAGCAGCTCAAGATAGATATAGAGGAGCTGAAGTTTCAG GCCGATCGTGCCGAACGGGAGGGCGATTACGGACGAGTGGCCGAGATACGCTACGGACTCATCAAGCAGAAAGAGACGGA GATCGACACGATACAGCAGCAGCTGCACGAATTGCAGCGTGGCGGCTCCATGATCAAGGAGGAAGTGGAGGCCGACGACA TAGCCGACATCGTGTCGCGCTGGACGGGTATCCCCGTCAGCCGCATGCTCCAGAGCGAGCGCGACAAGCTGCTTCATCTG GAGGACGAGCTGCACAAGCGCGTGATCGGTCAGGACGAAGCCATCCGTGCCGTGGCCGATGCCGTCCGTCGCAGCCGGGC AGGCCTTCAGGATCCCAAGCGTCCGATCGGTTCGTTCATCTTCCTCGGTACTACGGGGGTGGGCAAGACGGAGTTGGCAC GTGCCTTGGCCGAATTGCTCTTCGATGATGAGAGCATGCTTACGCGAATAGACATGAGCGAGTATCAGGAGAAGTTCAGT GCCACGCGTCTGATCGGTGCGCCTCCGGGGTATGTGGGCTATGACGAGGGTGGCCAATTGACGGAAGCCATTCGCCGCAA GCCTTATTCCGTGGTGCTTTTCGATGAAATAGAAAAAGCTCACCCGGATGTGTTCAACGTATTGCTGCAAGTCCTCGACG ATGGCCGCCTGACCGACAACAAGGGGCATGTGGTAAACTTCAAGAATACGCTCATCATCATGACGTCGAACCTCGGTTCG GACATCATTCGCGAGCGGATGCAGAACCTCACGGCGGAGAATCGCCGGTCCCTCACGGCCCGGACGGCCGATGAGGTGAT GCAGCTACTCAAGCATACGATCCGCCCCGAGTTTCTGAACCGTATCGACGAGACCATCGTCTTCACGCCACTGACCGAGA AGGAGATCTACGAGATCGTCCGCTTGCAGCTCGATGGTATCGTGCGCCAACTGGCCGATAACGACGTGGTGCTCCACTAT ACGGAGGCTGTCGTGACCTTTGCCGCTCGCGAGGGATATGATCCGCAGTTCGGAGCGCGTCCTGTGAAGCGAGTCCTGCA GCGATTCGTCCTCAACGAGCTGAGCAAGGCACTCTTGGCCGATACGGTGGACAGTACACGTCCCGTCCTCATCGATTGCA TAGACGGATCAATCGTCTTCCGCAACGAATAG Protein sequence : MNINNYTIKSQEALQQAVELTRRHGQQAIEPQHLLKAVMDQGESLTDFLFAKMGLNKGSIATAVDKLIEKLPHVSGGEPY LSHETNQVLQAAEDAAHRMKDKYVSLEHIVLAILTTRCEASTLLKDAGATEQLLQSAIEELRKGRNVTSQSAEEQYNALE KYAVNLCQRARDGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLAYRIVRGDVPENLRNKQIFSLDM GALIAGAKYKGEFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELRAIGATTLDEYRKY FEKDKALERRFQMVMVDEPDELSSISILRGLKEKYENHHKVRIKDDAIIAAVKLSHRYITERFLPDKAIDLMDEAAARLR MEVDSLPEELDEISRRIKQLEIEREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQLKIDIEELKFQ ADRAEREGDYGRVAEIRYGLIKQKETEIDTIQQQLHELQRGGSMIKEEVEADDIADIVSRWTGIPVSRMLQSERDKLLHL EDELHKRVIGQDEAIRAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELARALAELLFDDESMLTRIDMSEYQEKFS ATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDNKGHVVNFKNTLIIMTSNLGS DIIRERMQNLTAENRRSLTARTADEVMQLLKHTIRPEFLNRIDETIVFTPLTEKEIYEIVRLQLDGIVRQLADNDVVLHY TEAVVTFAAREGYDPQFGARPVKRVLQRFVLNELSKALLADTVDSTRPVLIDCIDGSIVFRNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-109 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-100 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_905329.1 | clpB protein | VFG2076 | Protein | 6e-124 | 44 |
| clpB | NP_905329.1 | clpB protein | VFG2084 | Protein | 7e-108 | 42 |
