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Name : TDE0425 (TDE0425) Accession : NP_971039.1 Strain : Treponema denticola ATCC 35405 Genome accession: NC_002967 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter ATP-binding/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 479840 - 482005 bp Length : 2166 bp Strand : + Note : identified by similarity to PIR:A39203; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193 DNA sequence : GTGTTTAATAAAAAATCCAATTTAACCGTGGTCTTGCAGCAAGATACTCAGGACTGCGGTCCTGCCTGTCTTGCAACTCT TTGCAAATATTACGGGAAAAGAATACCTATTTCTTATATACGCAAAATAGCAGGTACGGATAGAGGCGGTACCTCAGGAT ACGGAATTGTTCGCGGTGCAGAAGAATTAGGATTTTCATGTCAGGGAGCTTTAAGTCCCGAAAAAGAATTTTCCGAGGAC ATCGTCTTCCCCATAATTACTCATTTAAAAAGAAATGATTCAGAACATTATGTTGTAATTTTTAAAATTAAAAAAGATAA CGTAATTATAGGAGACCCTGCTTCAGGGCTTTTGAAAATACCTATAAGTGAATTTAAAAAAGAGTGGAGCGGTGTCTTTT TTGTTTTAACTCCTCAAGAAAAATTTAAGTTAAATAAAGATTCAGGCAGTATTTTAACCCGTTTTTTTTATCTTTTAAAG CCCCATAAAAAAATAGTAGGCGAAGTTCTTACGGCAAGTATACTCTTAAGTTTTTTAGGTATAATCGTTGCTTTTTATTT TCGGTTTTTGGTTGATGAAGTTTTATATTCAGGTACAAAAATAACGCTTAACTTGGTTTCTTTAGGATACCTTGTTGTAA TTATTTTTCAAACGCTGTTAAATATTTCGCGTAATCAACTTATGCTTCATATGAGCAGTAAGATGGAAGCTGCTTTAAGT TTTGAATACTTTGACCATGTTATTCATCTTCCGATGGATTTTTTTACTACACGCAAAACAGGAGAGGTCCTTTCCCGTAT TCATGATGTAAATACTATAAGACAGGTTCTGTCTTCTACAGGAATGAATATTATCTTGGACTCTCTAATGTTGGTTGTAG GCGGAGCTTTTTTATGTGCATCGGGCGGTATACTCATGCTGATTGCCGTTATTCCGGTTATTATTTCCGCTATTGTAATA TGTTTTTTTGTGCAGCCATATAGGAGAATGATAAAAGAAAAGGCCGTAATAGATGCCGAAAAATATTCGGGTATGGTAGA GTCCATAAACGGAATAGGAACGGTAAAGGCTCTTTCAAGTGAAGATCTTGCATTTGAGCGAACCGAGGTAAAAATGGTAG ATTCCGTAAATAAGGGGATTGAAATAGGTACGCTTGCAAATATAGAAAATGCCGTGCAAATGACTCTCTCACAGCTTGGA ACTTTAGGCGTTTATTGGGTAGGCAGTTTTAAAATATTAACCGGAACTATGAGCCTCGGGCAGTTGATAGCATTTTCTAT TTTATCGGGATATTTTTTAGGCCCCTTAGGGCGTTTATTAACCTTACAACCCACTTTACAGGAAGCCTTTGTTGCAGCAA ACCGTCTTTCCGAAATACTTGATATGCCTATCGAAAAAACAACCTATTCGGGAAAAACTAAAATAGAAAATATAGAAGGT TCTATCGACATTAAAGACCTTTGTTTTGCCTACGGTTTACATGGTAATACATTAGAAAATATTAATTTAAATATAAAACC CGGAATGAAAATTGCTTTTGTAGGAGCCTCCGGTTCAGGCAAAACAACACTTGTAAAACTGCTTATGAAATTTTATAATT TTCAAAGCGGGGAAATCCTTATTGACGGTTTAAATATAAAAGATTTGGAAACCGAATCGTATCGTAAACTTATAGGTTAT GTACCTCAAGAAGTTCTATTATTTTCAGGTTCAATTCGAGAAAATATTTTATGGGGAAACGGGTTTTTACCTGAAAATGC CTTGTATTATGCTGCAAAAGTTTCCCGCTCCGATGCTTTTATCAATAAGCTGCCCGATCGTTACGAAACAATTATAGGAG AACGGGGAGCAACTCTTTCGGGCGGTGAACGGCAGCGTATAGCCTTGGCCCGTATTTTACTTAGAGAACCTAAAATACTG ATACTTGATGAGGCGACTGCAAGTTTAGATGCTATTACCGAAAAAGCTATAATGAACACAATTGAAGAAATAATTGAAAA TAAAACTACAATTATTGTTGCTCACAGGCTTTCGACAATTATAAATTGCGATAAAATTTTTGTTTTTGATGGAGGTAAAA TAAAAGAAGAAGGAACACATAAAGAGCTTATTTTAAAAAACGGAATATATACCGATCTTTGGAATGCTCAAAATACAGGT GTTTAA Protein sequence : MFNKKSNLTVVLQQDTQDCGPACLATLCKYYGKRIPISYIRKIAGTDRGGTSGYGIVRGAEELGFSCQGALSPEKEFSED IVFPIITHLKRNDSEHYVVIFKIKKDNVIIGDPASGLLKIPISEFKKEWSGVFFVLTPQEKFKLNKDSGSILTRFFYLLK PHKKIVGEVLTASILLSFLGIIVAFYFRFLVDEVLYSGTKITLNLVSLGYLVVIIFQTLLNISRNQLMLHMSSKMEAALS FEYFDHVIHLPMDFFTTRKTGEVLSRIHDVNTIRQVLSSTGMNIILDSLMLVVGGAFLCASGGILMLIAVIPVIISAIVI CFFVQPYRRMIKEKAVIDAEKYSGMVESINGIGTVKALSSEDLAFERTEVKMVDSVNKGIEIGTLANIENAVQMTLSQLG TLGVYWVGSFKILTGTMSLGQLIAFSILSGYFLGPLGRLLTLQPTLQEAFVAANRLSEILDMPIEKTTYSGKTKIENIEG SIDIKDLCFAYGLHGNTLENINLNIKPGMKIAFVGASGSGKTTLVKLLMKFYNFQSGEILIDGLNIKDLETESYRKLIGY VPQEVLLFSGSIRENILWGNGFLPENALYYAAKVSRSDAFINKLPDRYETIIGERGATLSGGERQRIALARILLREPKIL ILDEATASLDAITEKAIMNTIEEIIENKTTIIVAHRLSTIINCDKIFVFDGGKIKEEGTHKELILKNGIYTDLWNAQNTG V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 1e-128 | 42 |
