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Name : secD (CBU_1142) Accession : NP_820141.1 Strain : Coxiella burnetii RSA 493 Genome accession: NC_002971 Putative virulence/resistance : Unknown Product : protein translocase subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1084027 - 1085895 bp Length : 1869 bp Strand : - Note : - DNA sequence : ATGAATCGATATCCGTTGTGGCGTTATATATTACTCGCCGTACTCATCATCATCAGTTTGATTTATGCGTTACCTAACTT GTATGGGGAAGATCCGGCTATTCAAATCTCAGCTAAGAATAGTGCTCCCATTGAGGCTGTTGAAGAAAAAATCAAATCAA CCTTAAACGCTCAACATATTTCTTATCTTTCGGTTCGGCCTGTCGATAATACCGTTTTGGTTCGCTTTCCCAGTACCGAA GATCAGCTTAAAGCGCAGGATGTGATTCAGGCTGTCGTTGGTACTGATTATTCCGTTGCATTGAATTTAGCGCCGCGGAC GCCCCGATGGTTACAGGCGATCGGCGCAAAACCGATGCGCTTAGGATTGGACCTGCGCGGCGGTATCCATTTCTTATTAG ATGTGGATGTTGGCGCCATGGTGAAAGCCCAGGAAACGGGCGATTTACATACCATGTCAACGGCGCTTCGCGAAGCCCGC ATTCGCTATACAGAGATGTCAAGCGACCAAAATGGCGTAATGATCCATTTCCGTGACCAAGCAGCCCGTGATCAGGCGCG CACGCTCTTGGAAAAACAATTTCCTGACTACCGTTTTGAAGCCACGGCATCGAGTCTTCGAGGCACTATTTCAATAACGG CATTGCACCAAATCCAGCAAAATGCCGTGGATCAAATAACAACGATCCTCAGAAACCGTGTTAATGAGTTAGGCGTTGCG GAACCGGTTATCCAACAGCAAGGAGAAAGCCAAATCAGCGTTGATTTGCCTGGCATTCAAGACACGGCTCGAGCCAAAGA TATTATTGGTAAAGTAGCGACCATTCGTTTGCAATTGGTGGATGTTGAACACGATGCTGAAACAGCCTCGAGCACGGGGA CTGTGCCTTTTGGTTCAAAATTATATACCTTCGAAAAGCAGCTCGTACTATTGAAGCAGCAGGTCGTGTTAAAAGGAACT TCGATTATTAACGCCTCGAGTGTTATTGGAGAAGATGGCCGCCCAGCGGTGCGAGTTCGGGTGAGTGGCAGCGATGTGCC TTCTTTTAATCGAATTACGGGGGAAAACGTCGGCAAACCTTTAGCCGTTGTTTACGTAGAAACTCAAACTACGCGTCATT TAGTCGATGGAAAGGTGGTGACTCAACACCGCCAAATTGAGCGTATTATTAATATAGCGACGATTCAAACTGCTCTTGGA AATGATTTCCAAATAACTAACTTATCTACGATGGATTACGCAAAAAATTTAGCCTTGTTATTACGCTCTGGCGCTTATCC TGTCCCCGTTGATTTTGTGCAAGAACGAGTGGTGGGCCCGAGTTTGGGCCAAGAAAATATCCACATGGGGGTTTTATCTA CCGAAATTGGCGCTTTATTGGTGATTGTGTTTATGGCGTTCTACTATCGGCTGTTCGGCGTCATTGCTGACATCGCGTTA GCTTTGAATATCGTCTTTATTGTTGCGGTGTTATCCATTTTGGGTGCTACCCTCACTTTGCCCGGTATTGCGGGTATTGT GTTAACAGTGGGGATGGCTGTCGATGCGAATGTGTTAATTAACGAGCGAATACGAGAAGAGTTGCGCAATGGGATGTCGC CGCAAGCGAGTATCAAAGCTGGATACGATCGGGCTTTTGCTACCATTGTGGATGCCAATGTGACCACGCTGATTGTAATG ATTATCTTATTTGCTTTAGGCTCGGGGCCAGTCCAAGGCTTTGCTGTGACGACGACTATTGGTTTGTTGTCGTCGATGGT GACAGCGATTTTCTTTACACGGGCGGTGGTGAATTTAGTGTACGGACGGCGCAGAGCTTCACGTTTGTCTATTGGGATTA ACGCAAAATCCGCAGAGGCTAAGAAGTAA Protein sequence : MNRYPLWRYILLAVLIIISLIYALPNLYGEDPAIQISAKNSAPIEAVEEKIKSTLNAQHISYLSVRPVDNTVLVRFPSTE DQLKAQDVIQAVVGTDYSVALNLAPRTPRWLQAIGAKPMRLGLDLRGGIHFLLDVDVGAMVKAQETGDLHTMSTALREAR IRYTEMSSDQNGVMIHFRDQAARDQARTLLEKQFPDYRFEATASSLRGTISITALHQIQQNAVDQITTILRNRVNELGVA EPVIQQQGESQISVDLPGIQDTARAKDIIGKVATIRLQLVDVEHDAETASSTGTVPFGSKLYTFEKQLVLLKQQVVLKGT SIINASSVIGEDGRPAVRVRVSGSDVPSFNRITGENVGKPLAVVYVETQTTRHLVDGKVVTQHRQIERIINIATIQTALG NDFQITNLSTMDYAKNLALLLRSGAYPVPVDFVQERVVGPSLGQENIHMGVLSTEIGALLVIVFMAFYYRLFGVIADIAL ALNIVFIVAVLSILGATLTLPGIAGIVLTVGMAVDANVLINERIREELRNGMSPQASIKAGYDRAFATIVDANVTTLIVM IILFALGSGPVQGFAVTTTIGLLSSMVTAIFFTRAVVNLVYGRRRASRLSIGINAKSAEAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-106 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-106 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-106 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-106 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-106 | 43 |
