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Name : glcD (MCA1501) Accession : YP_113958.1 Strain : Methylococcus capsulatus Bath Genome accession: NC_002977 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 1598878 - 1600332 bp Length : 1455 bp Strand : - Note : identified by similarity to SP:P52075; match to protein family HMM PF01565; match to protein family HMM PF02913 DNA sequence : GTGGAACGGGCGGCCTTTCTCCGCGAGTTGAAGCGTGTCCTCCCGGAGGAGGCCCTATTGAGCGACCCGGAGGATCTGAG GCCCTTCGAATGCGATGCGCTTGCTGCCTACACCGTCCTGCCTTGGATCGCCGTGCTGCCGGAAACCGTGGAACAGGTCC GGGCGGTGCTGCGTCTGTGCCATTCGCAGAACGTGCCGGTCGTGGCCCGGGGGGCCGGAACCGGTCTTTCCGGCGGCGCC TTGCCCGTGGCTGACGGCGTGCTGTTGAGCCTGGCCAAGTTCGACCGTATCCTGGAAATCGATCCCGCCAACCGCATGGC CCGGGTGCAGCCGGGCGTCCGCAACCTCGCCATCTCCGAGGCGGCGGCGCCTTTCGGCCTGTATTACGCTCCGGACCCCT CCTCTCAGGTGGCCTGCACCATCGGCGGCAACGTGGCGGAGAATTCCGGCGGGGTGCATTGCCTGAAGTACGGCTTGACC GTGCACAATGTGCTGCAAGTCAGTCTGCTGACCGTCGAAGGCGAACCGCTGACACTGGGTTCGCTGGGGTTGGACGGTCC CAGCTACGATCTGCTCGCCCTGATCAACGGCTCGGAGGGCTTGCTCGGCGTGATCGTCGAGGTCGTCGTCAAGCTGCTGC CGGTGCCGGAAACGGCCCGGACATTGCTCGCGGCGTTCAGCAGTATCGAGGCGGCTGGCGATGCCGTGGCCGGCGTGATC GGGGCGGGTCTGGTGCCGGCAGGGCTGGAGATGATGGACAACCTCACGCTTCGAGCGACGGAGAACTTCGTCCACGCCGG CTACCCGGTCGACGCGGCGGCCGTCGTGCTGTGCGAAATGGACGGCATGGCCGAGCAGGTCGAGGCCGAGATCGCCCGGG CACGCCGGGTGCTGGAGTCGCACGGCGCGACCGAAGTACGTGAAGCCCGTGACGAAGCCGAGCGCCGGAAATTCTGGGCC GGGCGCAAGGCGGCTTTCCCGGCGGTCGGACGGATCGCTCCGGATTATTACTGCATCGACGGCACGATTCCCAGGAAGCG GCTGGCGGAAGTGCTGGGGCGGATAGGCGAGCTTTCGGAGCAATTCGGCTTGGCCGTGGGCAACGTCTTCCATGCCGGCG ACGGAAACCTGCATCCCCTGATCCTCTACGATGCCTCCCATCCCGGCGAACTGGAGCGCGCCGAGGCGCTGGGGGAGGAA ATCCTCACCCTCTGCGTCGAGGTTGGCGGAACCGTGACCGGCGAGCACGGGGTCGGCATCGAGAAGCTCGGTCCGATGTG TGTCCAGTTCGGCGCGCCGGAGCTGCGGCAGTTTCACGCGTTGAAGGCGGCCTTCGACGCCGGCGGGCTGCTCAATCCCG GCAAGGCCGTGCCGACACTGATGCGCTGCGCCGAACTCGGCCGGATGCACGTGCACGGCGGCCGCCTCCCCCACCCCGAA CTGGAGCGGTTCTGA Protein sequence : MERAAFLRELKRVLPEEALLSDPEDLRPFECDALAAYTVLPWIAVLPETVEQVRAVLRLCHSQNVPVVARGAGTGLSGGA LPVADGVLLSLAKFDRILEIDPANRMARVQPGVRNLAISEAAAPFGLYYAPDPSSQVACTIGGNVAENSGGVHCLKYGLT VHNVLQVSLLTVEGEPLTLGSLGLDGPSYDLLALINGSEGLLGVIVEVVVKLLPVPETARTLLAAFSSIEAAGDAVAGVI GAGLVPAGLEMMDNLTLRATENFVHAGYPVDAAAVVLCEMDGMAEQVEAEIARARRVLESHGATEVREARDEAERRKFWA GRKAAFPAVGRIAPDYYCIDGTIPRKRLAEVLGRIGELSEQFGLAVGNVFHAGDGNLHPLILYDASHPGELERAEALGEE ILTLCVEVGGTVTGEHGVGIEKLGPMCVQFGAPELRQFHALKAAFDAGGLLNPGKAVPTLMRCAELGRMHVHGGRLPHPE LERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 5e-125 | 63 |
