|
Name : cobT (CA_C1372) Accession : NP_348000.1 Strain : Clostridium acetobutylicum ATCC 824 Genome accession: NC_003030 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 1515811 - 1516869 bp Length : 1059 bp Strand : + Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGAATATAGAAAATTTGATAAAGGGTATTAATGGATTAGACAATAAGGTCATGAGTAAGATTCAAAAAAGATTGGACAA CTTAACAAAGCCTTTAGGAAGTCTTGGAACCTTGGAGGATATAGTAAAGCAGCTTGGAGGAATAACAGGAGAGGTGTACC CTTCAGTTAAAAATAAAACGGTTATTATAATGTGTGCAGATAATGGAATTGTTGAGGAAAATGTTAGTTCATGTCCCAAA AGTGTTACAGCGTCGGTTACTAGGAATTTTATGAAAGGCTTCACAGGAATAAATGTTTTTACAAGACATGCAGGAGCAGA CATAGAGGTTATAGATATAGGTGTAGATGCAGACATAAATGAAGAAGGAATAATAAATAAAAAGATAAGACGAGGAACCA GCAACATGATTAAAGGTGCTGCAATGACTAGAGATGAGGCTTTAAAAGGGCTAGAAGTAGGTATTGAAGCAGTAAAAGAG CTTAAGGATAAGGGTGTAAACCTAATTGGAACGGGAGAAATGGGAGTAGGTAATACTACAACCAGCAGTGCAGTGGCTTC AGTTTTGACAGGTTGCCCGGTAGACGAAATGGTTGGAATAGGTTCAGGACTTACAAAGGAAGCCTTTAGAAATAAAATTC AAATTGTGAAGGAAGCAATAGCACTTAACAAACCTAATAAAGAAGATCCAATTGATGTTTTAAGTAAGGTGGGTGGTTTT GATATAGCTGGGCTTGCAGGATGTTTTTTAGGAGCTGCAATTTATAGAATACCAATAGTTATCGATGGTTTTATATCAGC ATCTGCTGCACTTTTAGCAGTTAAAATAAATCCATTAGTTAAAAACTTTATAATTCCGTCTCATGGTTCAGCAGAACCTG GAAGCAAGTGGATTATGAAAGAGCTTGATTTAGAACCAATGTTGAATTTAAAGATGCGACTAGGTGAGGGAACTGGTGCA GCGCTTGCTTTTCAAATAGTAGATATGGCTGTATTTTCCTATCTTGAAATGGGAACCTTTGAAAATGCTGAGATAGAACC CTATAAACCACTAAAATAA Protein sequence : MNIENLIKGINGLDNKVMSKIQKRLDNLTKPLGSLGTLEDIVKQLGGITGEVYPSVKNKTVIIMCADNGIVEENVSSCPK SVTASVTRNFMKGFTGINVFTRHAGADIEVIDIGVDADINEEGIINKKIRRGTSNMIKGAAMTRDEALKGLEVGIEAVKE LKDKGVNLIGTGEMGVGNTTTSSAVASVLTGCPVDEMVGIGSGLTKEAFRNKIQIVKEAIALNKPNKEDPIDVLSKVGGF DIAGLAGCFLGAAIYRIPIVIDGFISASAALLAVKINPLVKNFIIPSHGSAEPGSKWIMKELDLEPMLNLKMRLGEGTGA ALAFQIVDMAVFSYLEMGTFENAEIEPYKPLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-63 | 45 |
