Name : rnhA (SMc00018) Accession : NP_385020.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 1000917 - 1001378 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAGCACGTCCACATCTTTACCGACGGTGCGTGCTCGGGAAATCCCGGACCGGGCGGTTGGGGCGCGGTCCTGCGCTA CGGCGACGTGGAGAAGGAAATGTCCGGCGGAGAGGCGGAGACGACGAACAACCGCATGGAGCTTCTCGCGGCGATCTCTG CCCTCAACGCGCTCAGGCAGCCCTGCGAGGTCGATCTCCATACCGACAGCAAATATGTGATGGACGGTATCTCCAAATGG ATACACGGCTGGAAGCGCAACGGCTGGAAAACCGGCGACCGGAAGCCGGTGAAGAACGGCGAGTTATGGCAGGCGCTCGA TGAGGCAAGGAACCGCCACAACGTGACCTGGCACTGGGTGAAGGGCCACGCCGGCCATCCGGAGAACGAACGCGCCGACG AACTTGCGCGCAAGGGCATGGAACCGTTCAAGAAGGCGCGTCGTGCGGACGCGGTGAAATAG Protein sequence : MKHVHIFTDGACSGNPGPGGWGAVLRYGDVEKEMSGGEAETTNNRMELLAAISALNALRQPCEVDLHTDSKYVMDGISKW IHGWKRNGWKTGDRKPVKNGELWQALDEARNRHNVTWHWVKGHAGHPENERADELARKGMEPFKKARRADAVK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-39 | 58 |