Gene Information

Name : rnhA (SMc00018)
Accession : NP_385020.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 1000917 - 1001378 bp
Length : 462 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGAAGCACGTCCACATCTTTACCGACGGTGCGTGCTCGGGAAATCCCGGACCGGGCGGTTGGGGCGCGGTCCTGCGCTA
CGGCGACGTGGAGAAGGAAATGTCCGGCGGAGAGGCGGAGACGACGAACAACCGCATGGAGCTTCTCGCGGCGATCTCTG
CCCTCAACGCGCTCAGGCAGCCCTGCGAGGTCGATCTCCATACCGACAGCAAATATGTGATGGACGGTATCTCCAAATGG
ATACACGGCTGGAAGCGCAACGGCTGGAAAACCGGCGACCGGAAGCCGGTGAAGAACGGCGAGTTATGGCAGGCGCTCGA
TGAGGCAAGGAACCGCCACAACGTGACCTGGCACTGGGTGAAGGGCCACGCCGGCCATCCGGAGAACGAACGCGCCGACG
AACTTGCGCGCAAGGGCATGGAACCGTTCAAGAAGGCGCGTCGTGCGGACGCGGTGAAATAG

Protein sequence :
MKHVHIFTDGACSGNPGPGGWGAVLRYGDVEKEMSGGEAETTNNRMELLAAISALNALRQPCEVDLHTDSKYVMDGISKW
IHGWKRNGWKTGDRKPVKNGELWQALDEARNRHNVTWHWVKGHAGHPENERADELARKGMEPFKKARRADAVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-39 58