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Name : glcD (SMc00832) Accession : NP_384883.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 853444 - 854883 bp Length : 1440 bp Strand : + Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGCCGGAGACGATCGGCTTTCTGAAGCCAAGGCAGGCCGTCCTCGATCGTCGGCGGGAAATCGTCGCCGATCTTGCCGA TCTGTTGCCGGAAGGCGGCCTCATCAGCGACGAGCGCGGCCTCAAGCCCTTCGAGACGGATGCGTTTATCGCCTATCGGC GGATGCCGCTCGCGGTCGTTCTTCCCGAGACGACGGAGCACGTGGCCGCGGTGCTCAAATATTGCAGCCGCTACGGCATT CCGATCGTGCCGCGGGGCGCCGGCACCTCGCTCTCCGGCGGCGCCATTCCTCAGGAGGACGCGATCGTCGTCGGTCTGTC GAAGATGTCGCGCACCCTGGATATCGACCTGTTCAACCGCACGGCGACGGTTCAGGCGGGCGTGACCAATCTCAATATTT CCGATGCGGTTTCGGCCGACGGCTTCTTCTATGCCCCGGATCCGAGTTCGCAGCTCGCCTGCACCATAGGCGGGAACATC GGGATGAATTCCGGCGGCGCGCACTGTCTGAAGTACGGGGTTACGACCAACAACCTTCTGGGCGTCAAGATGGTGCTTTT CGACGGCACCGTGATCGAACTCGGCGGCAAGGCGCTCGACGCGCCGGGATACGACCTGCTTGGGCTCGTCTGCGGTTCGG AGGGGCAGCTCGGCATCGTCACGGAAGCGACGGTGCGGCTGATTGCGAAGCCCGAAGGTGCGCGGCCCGTGCTCTTCGGA TTTGCCTCTTCCGAGTCCGCCGGCAGCTGCGTCGCCGATATCATTGGATCGGGCATCATCCCCGTCGCAATCGAATTCAT GGACAGGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCAGGCCGGCTATCCGCTCGACGTCGAAGCATTGCTGATCGTCG AAGTGGAAGGCTCCGAGGCTGAGATGGATGCGACGCTCGCCGGCATCATCGAGATCGCCCGCCGCCACGGCGTGATGACG ATCAGGGAATCGCAATCGGCTCTGGAAGCGGCACTGATCTGGAAGGGGCGTAAGTCGGCCTTCGGCGCAACCGGCCGGAT TGCCGACTATATCTGCATGGACGGAACGGTGCCGCTGAGCCAGCTCTCCCATGTCTTGCGCCGGACCGGGGAGATCGTCG CCGGCTACGGCCTGCGGGTAGCGAATGTCTTCCATGCCGGCGATGGCAACATGCATCCGCTGATCCTCTACAACATCAAC GATCCGGAGGAAGCTGCCCGCGCGGAAGCTGCCGGCAACGACATACTGAAGCTTTGCGTCGAGGCGGGCGGCTGCCTGAC CGGGGAACACGGCGTCGGCATCGAGAAACGCGATCTGATGCTGCACCAGTACAGCAGGGCCGATCTCGGCCAGCAGATGG CGGCGCGCGCCGCCTTCGATCCGCAATGGCTTATGAACCCGTCGAAGGTTTTTCCGCTCGAAGGACGGCCCGCGGCATGA Protein sequence : MPETIGFLKPRQAVLDRRREIVADLADLLPEGGLISDERGLKPFETDAFIAYRRMPLAVVLPETTEHVAAVLKYCSRYGI PIVPRGAGTSLSGGAIPQEDAIVVGLSKMSRTLDIDLFNRTATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVKMVLFDGTVIELGGKALDAPGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG FASSESAGSCVADIIGSGIIPVAIEFMDRPAIEICEAFAQAGYPLDVEALLIVEVEGSEAEMDATLAGIIEIARRHGVMT IRESQSALEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLRRTGEIVAGYGLRVANVFHAGDGNMHPLILYNIN DPEEAARAEAAGNDILKLCVEAGGCLTGEHGVGIEKRDLMLHQYSRADLGQQMAARAAFDPQWLMNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-100 | 48 |
